DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cow and SPOCK2

DIOPT Version :9

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001231879.1 Gene:SPOCK2 / 9806 HGNCID:13564 Length:424 Species:Homo sapiens


Alignment Length:678 Identity:140/678 - (20%)
Similarity:214/678 - (31%) Gaps:320/678 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASAC----LALVLMSSSLIGSTEARNKKKYVGETGGDF---------------------EFIDEI 47
            |..|    |.|:|::::.:...:|:..|:  |||.|:|                     .|.||:
Human     3 APGCGRLVLPLLLLAAAALAEGDAKGLKE--GETPGNFMEDEQWLSSISQYSGKIKHWNRFRDEV 65

  Fly    48 N----KNTQSNKNLGEHKRWIHDPSSDLCRPLNCKKREICLLEDEFSAVCVSKKELHKNRDEIIT 108
            .    |:.:.|:...|    ..|.:.|.|:.:.|.:.::|:.:....|:|:|:|:|         
Human    66 EDDYIKSWEDNQQGDE----ALDTTKDPCQKVKCSRHKVCIAQGYQRAMCISRKKL--------- 117

  Fly   109 KAKYLEEEAKRRVNQQDNQDSQDAEDINNDDEDNSSDGGSSNSSPTGTNNAQASVQGNEETDDED 173
                     :.|:.|                             ||      ..:.||::     
Human   118 ---------EHRIKQ-----------------------------PT------VKLHGNKD----- 133

  Fly   174 KSLSLGDDDESKEDDVFYENSIAAGDKQQQQQQLSQPAAGPSVIQQDDDEELDNCKPCPVAKPTF 238
                                ||                                ||||.:|:...
Human   134 --------------------SI--------------------------------CKPCHMAQLAS 146

  Fly   239 LCGADNRTYSSLCRLDYHNCIHSTSIRIACKGFCPC------KEIVDGKRLQRISGYNNKYNKKI 297
            :||:|..||||:|:|:...|:.|..:.:.|:|.|||      ....|||                
Human   147 VCGSDGHTYSSVCKLEQQACLSSKQLAVRCEGPCPCPTEQAATSTADGK---------------- 195

  Fly   298 SLDQQQQQQQQQQQQQQQQQAYKDSNNNNIMMNSGNIMGGNNNDFNTIMNDKEDNNRHNNHINAQ 362
                                                                             
Human   196 ----------------------------------------------------------------- 195

  Fly   363 YTFTPEEIKYDNKHYKYLKYTAYKKDSKYQEDKHKMRNYNEVVEKQQQKFNKNSNLNAYPSKSAE 427
                ||                                                          .
Human   196 ----PE----------------------------------------------------------T 198

  Fly   428 CKPQQLTAIGNRLLDWFSVIMADSKKRRQHSQKSKAHFP---------PACKTEAKWMFGHLDLN 483
            |..|.|..:|:||.|||.::..:||   |:...|....|         .:||....|||..||.:
Human   199 CTGQDLADLGDRLRDWFQLLHENSK---QNGSASSVAGPASGLDKSLGASCKDSIGWMFSKLDTS 260

  Fly   484 NDGQLSLQEMYDLEHDQNERCIKPFIDTCDLDTDSSINTREWCRCFEKTDRPCAAVRRRIAGDFA 548
            .|..|...|:..:..|:.|.||:||.::||...|..::|.|||.||.:...||.|...||....|
Human   261 ADLFLDQTELAAINLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERIQIQEA 325

  Fly   549 G--EIGAYAPDCDIQGFYKPTQCHNSVGVCWCVDKHGVEFANTRTRGKPNCESVVNNAASLTS-- 609
            .  :.|.:.|.||..|:|:..||..|.|.|||||:.|:|...|||.|.|:|:.:|..:....|  
Human   326 AKKKPGIFIPSCDEDGYYRKMQCDQSSGDCWCVDQLGLELTGTRTHGSPDCDDIVGFSGDFGSGV 390

  Fly   610 ---DDED-------EGADDEDSAEGSAD 627
               |:|:       |.|::|:...|.||
Human   391 GWEDEEEKETEEAGEEAEEEEGEAGEAD 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624 13/31 (42%)
SPARC_EC 427..539 CDD:238155 41/120 (34%)
SPARC_Ca_bdg 427..526 CDD:287550 35/107 (33%)
TY 535..597 CDD:238114 28/63 (44%)
SPOCK2NP_001231879.1 KAZAL <147..180 CDD:197624 13/32 (41%)
SPARC_Ca_bdg 197..303 CDD:287550 36/166 (22%)
SPARC_EC 198..316 CDD:238155 41/120 (34%)
TY 312..376 CDD:238114 28/63 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..424 9/32 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149373
Domainoid 1 1.000 74 1.000 Domainoid score I9139
eggNOG 1 0.900 - - E1_KOG3555
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I3289
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1235834at2759
OrthoFinder 1 1.000 - - FOG0002140
OrthoInspector 1 1.000 - - otm41577
orthoMCL 1 0.900 - - OOG6_110187
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5366
SonicParanoid 1 1.000 - - X1424
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.690

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