DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cow and Spock2

DIOPT Version :10

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_443720.1 Gene:Spock2 / 94214 MGIID:1891351 Length:423 Species:Mus musculus


Alignment Length:666 Identity:138/666 - (20%)
Similarity:208/666 - (31%) Gaps:301/666 - (45%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SACLALVLMSSSLIGSTEARNKKKYVGETGGDF---------------------EFIDEIN---- 48
            |..|||.|:..:::...|...|....|||.|:|                     .|.||:.    
Mouse     6 SGRLALPLLLLAVVALAEGDAKGLKEGETPGNFMEDEQWLSSISQYSGKIKHWNRFRDEVEDDYI 70

  Fly    49 KNTQSNKNLGEHKRWIHDPSSDLCRPLNCKKREICLLEDEFSAVCVSKKELHKNRDEIITKAKYL 113
            |:.:.|:...|    ..|.:.|.|:.:.|.:.::|:.:....|:|:|:|:|              
Mouse    71 KSWEDNQQGDE----ALDTTKDPCQKVKCSRHKVCVAQGYQRAMCISRKKL-------------- 117

  Fly   114 EEEAKRRVNQQDNQDSQDAEDINNDDEDNSSDGGSSNSSPTGTNNAQASVQGNEETDDEDKSLSL 178
                :.|:.|                                                  .||.|
Mouse   118 ----EHRIKQ--------------------------------------------------PSLKL 128

  Fly   179 GDDDESKEDDVFYENSIAAGDKQQQQQQLSQPAAGPSVIQQDDDEELDNCKPCPVAKPTFLCGAD 243
                ...:|.|                                      ||||.:|:...:||:|
Mouse   129 ----HGGKDSV--------------------------------------CKPCHMAQLASVCGSD 151

  Fly   244 NRTYSSLCRLDYHNCIHSTSIRIACKGFCPCKEIVDGKRLQRISGYNNKYNKKISLDQQQQQQQQ 308
            ..||||:|:|:...|:.|..:.:.|:|.|||                                  
Mouse   152 GHTYSSVCKLEQQACLSSKQLAVRCEGPCPC---------------------------------- 182

  Fly   309 QQQQQQQQQAYKDSNNNNIMMNSGNIMGGNNNDFNTIMNDKEDNNRHNNHINAQYTFTPEEIKYD 373
                                                                      |.|    
Mouse   183 ----------------------------------------------------------PTE---- 185

  Fly   374 NKHYKYLKYTAYKKDSKYQEDKHKMRNYNEVVEKQQQKFNKNSNLNAYPSKSAECKPQQLTAIGN 438
                                                     .|..:...|||..|..|.|..:|:
Mouse   186 -----------------------------------------QSTASTTDSKSETCTGQDLADLGD 209

  Fly   439 RLLDWFSVIMADSKKRRQHSQKSKAHFP--------PACKTEAKWMFGHLDLNNDGQLSLQEMYD 495
            ||.|||.::..:||   |:...:.|..|        .:||....|||..||.:.|..|...|:..
Mouse   210 RLRDWFQLLRENSK---QNGSANSATNPAGLDKSLGASCKDSIGWMFSKLDTSGDLFLDQTELAA 271

  Fly   496 LEHDQNERCIKPFIDTCDLDTDSSINTREWCRCFEKTDRPCAA--VRRRIAGDFAGEIGAYAPDC 558
            :..|:.|.||:||.::||...|..::|.|||.||.:...||.|  .|.:|......:.|.:.|.|
Mouse   272 INLDKYEVCIRPFFNSCDTYKDGRVSTAEWCFCFWREKPPCLAELERTQIQEAAKKKPGVFIPSC 336

  Fly   559 DIQGFYKPTQCHNSVGVCWCVDKHGVEFANTRTRGKPNCESVVNNAASLTS-----DDED----- 613
            |..|:|:..||..|.|.|||||:.|:|...||..|.|:|:.:|..:....|     |:|:     
Mouse   337 DEDGYYRKMQCDQSRGDCWCVDQLGLELTGTRMHGTPDCDDIVGFSGDFGSGVGWEDEEEKETEE 401

  Fly   614 --EGADDEDSAEGSAD 627
              |.|::|:...|.||
Mouse   402 AGEEAEEEEGEAGEAD 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624 13/31 (42%)
EFh_SPARC_TICN 428..533 CDD:320011 39/112 (35%)
EF-hand motif 469..500 CDD:320011 10/30 (33%)
EF-hand motif 501..533 CDD:320011 14/31 (45%)
TY 535..597 CDD:238114 26/63 (41%)
Spock2NP_443720.1 Kazal_2 134..180 CDD:400135 19/83 (23%)
EFh_SPARC_EC 199..309 CDD:330171 39/112 (35%)
EF-hand motif 245..276 CDD:320017 10/30 (33%)
EF-hand motif 277..307 CDD:320017 14/29 (48%)
Thyroglobulin_1 312..375 CDD:459665 25/62 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 387..423 9/31 (29%)

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