Protein Alignment Cow and cd74a

DIOPT Version :9

• Sequence 1: NP_001262857.1
• Gene: Cow / 42733
• FlyBaseID: FBgn0039054
• Length: 632
• Species: Drosophila melanogaster
• Sequence 2: NP_571665.1
• Gene: cd74a / 58113
• ZFINID: ZDB-GENE-000901-1
• Length: 237
• Species: Danio rerio
• Alignment Length: 99
• Identity: 36/99 - (36%)
• Similarity: 44/99 - (44%)
• Gaps: 21/99 - (21%)

  Fly   507 PFIDTCDLDTDSS----INTREWCRC-FEKTDRPCAAVRRRIAGDFAGEIGAYAPDCDIQGFYKP 566
            |.:...|.|..||    :.....|:. .|:..||                |.:.|.||.:|.|.|
Zfish   155 PLLVNADEDVKSSPESVVELETKCKLESEREVRP----------------GFFKPACDEEGNYMP 203

  Fly   567 TQCHNSVGVCWCVDKHGVEFANTRTRGKPNCESV 600
            .||.:|.|.||||.|.|.|...||.||:|.||||
Zfish   204 MQCWHSTGYCWCVTKDGTEIEGTRIRGRPQCESV 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Cow	NP_001262857.1	KAZAL	<240..272	CDD:197624
		SPARC_EC	427..539	CDD:238155	9/36 (25%)
		SPARC_Ca_bdg	427..526	CDD:287550	5/22 (23%)
		TY	535..597	CDD:238114	24/61 (39%)
cd74a	NP_571665.1	MHC2-interact	4..109	CDD:286400
		TY	177..234	CDD:238114	27/72 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	1	0.960	-	-
ZFIN	0	0.000	Not matched by this tool.
	1	0.960