DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cow and SPOCK3

DIOPT Version :9

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_016863746.1 Gene:SPOCK3 / 50859 HGNCID:13565 Length:445 Species:Homo sapiens


Alignment Length:690 Identity:140/690 - (20%)
Similarity:211/690 - (30%) Gaps:330/690 - (47%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 HSPLI---------ASACLALVLMSSSLIGSTEARNKKKYVGETGGDFE---FIDE---INKNTQ 52
            |.||.         |..|:......|..:.:..|      |...||..:   |:|:   :...:|
Human     4 HPPLCLLSQMLKVSAVLCVCAAAWCSQSLAAAAA------VAAAGGRSDGGNFLDDKQWLTTISQ 62

  Fly    53 SNKNLGE---------HKRW--------IHDPSSDLCRPLNCKKREICLLEDEFSAVCVSKKEL- 99
            .:|.:|:         .:.|        ..||:.|.|..:.|.:.::|:.:|..:|||:|.:.| 
Human    63 YDKEVGQWNKFRDDDYFRTWSPGKPFDQALDPAKDPCLKMKCSRHKVCIAQDSQTAVCISHRRLT 127

  Fly   100 HKNRDEIITKAKYLEEEAKRRVNQQDNQDSQDAEDINNDDEDNSSDGGSSNSSPTGTNNAQASVQ 164
            |:.::                                                            
Human   128 HRMKE------------------------------------------------------------ 132

  Fly   165 GNEETDDEDKSLSLGDDDESKEDDVFYENSIAAGDKQQQQQQLSQPAAGPSVIQQDDDEELDNCK 229
                                            ||...:|.:       ||.         |..||
Human   133 --------------------------------AGVDHRQWR-------GPI---------LSTCK 149

  Fly   230 PCPVAKPTFLCGADNRTYSSLCRLDYHNCIHSTSIRIACKGFCPCKEIVDGKRLQRISGYNNKYN 294
            .|||..|:.:||:|..|||..|:|:|..|:....|.:.|:|.|||.                   
Human   150 QCPVVYPSPVCGSDGHTYSFQCKLEYQACVLGKQISVKCEGHCPCP------------------- 195

  Fly   295 KKISLDQQQQQQQQQQQQQQQQQAYKDSNNNNIMMNSGNIMGGNNNDFNTIMNDKEDNNRHNNHI 359
                                                                :||.         
Human   196 ----------------------------------------------------SDKP--------- 199

  Fly   360 NAQYTFTPEEIKYDNKHYKYLKYTAYKKDSKYQEDKHKMRNYNEVVEKQQQKFNKNSNLNAYPSK 424
                |.|...:|                                                     
Human   200 ----TSTSRNVK----------------------------------------------------- 207

  Fly   425 SAECKPQQLTAIGNRLLDWFSVIM---ADSKKRRQHSQKSKAHFP----PACKTEAKWMFGHLDL 482
             ..|...:...:.|||.|||..:.   :.:||.:...:..::.|.    |.||....|||..||.
Human   208 -RACSDLEFREVANRLRDWFKALHESGSQNKKTKTLLRPERSRFDTSILPICKDSLGWMFNRLDT 271

  Fly   483 NNDGQLSLQEMYDLEHDQNERCIKPFIDTCDLDTDSSINTREWCRCFEK-TDRPC----AAVRRR 542
            |.|..|...|:..:..|:||:|.|.|.::||...||.|:..|||.||:: .|.||    :.:::|
Human   272 NYDLLLDQSELRSIYLDKNEQCTKAFFNSCDTYKDSLISNNEWCYCFQRQQDPPCQTELSNIQKR 336

  Fly   543 IAGDFAGE---IGAYAPDCDIQGFYKPTQCHNSVGVCWCVDKHGVEFANTRTRGKPNC------- 597
                 .|.   :|.|.|.||..|:|||||||.|||.|||||::|.|...:|..|..:|       
Human   337 -----QGVKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVMGSRINGVADCAIDFEIS 396

  Fly   598 ------------------ESVVNNAASLTSDDEDEGADDE 619
                              :.::|:...:..||||||.||:
Human   397 GDFASGDFHEWTDDEDDEDDIMNDEDEIEDDDEDEGDDDD 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624 13/31 (42%)
SPARC_EC 427..539 CDD:238155 41/123 (33%)
SPARC_Ca_bdg 427..526 CDD:287550 34/105 (32%)
TY 535..597 CDD:238114 29/68 (43%)
SPOCK3XP_016863746.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165149372
Domainoid 1 1.000 74 1.000 Domainoid score I9139
eggNOG 1 0.900 - - E1_KOG3555
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I3289
Isobase 1 0.950 - 0 Normalized mean entropy S6033
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1235834at2759
OrthoFinder 1 1.000 - - FOG0002140
OrthoInspector 1 1.000 - - otm41577
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5366
SonicParanoid 1 1.000 - - X1424
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.740

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