DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cow and magu

DIOPT Version :10

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_610548.2 Gene:magu / 36048 FlyBaseID:FBgn0262169 Length:613 Species:Drosophila melanogaster


Alignment Length:461 Identity:102/461 - (22%)
Similarity:149/461 - (32%) Gaps:154/461 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   195 IAAGDKQQQQQQLSQPAAGPSVIQQDDDEELDNCKPCPVAKPTFLCGADNRTYSSLCRLDYHNC- 258
            ||.|....|..:|  ||......:.||:|.       ||      ||.|.:||.:.|.|....| 
  Fly    16 IATGKSDDQLMKL--PACAAKQGECDDNEG-------PV------CGTDGQTYPTRCHLLRAQCG 65

  Fly   259 IHSTSIRIACKGFC-PCKEIVDGKRLQRISGYNNKYNKKISLDQQQQQQQQQQQQQQQQQAY--- 319
            .|..|::.:  |.| .|.|.|...|                            :||::...|   
  Fly    66 GHQVSLKYS--GSCNACLEAVKFAR----------------------------RQQERDPGYFVP 100

  Fly   320 ---KDSN--------NNNIMM--NSGNIMGGNNNDFN-----TIMNDKEDNNRHNNHINAQYTFT 366
               ||.|        ||....  :.|..:..:|..|.     ....::.|..|..:|   |..:.
  Fly   101 RCRKDGNFAAMQCYGNNGCWCSDSQGRPIADDNKQFRRKGKLRCRANRRDRRRLASH---QIGYN 162

  Fly   367 PEEIKYDNKHYKYLKYTAYKKDSKYQEDKHKMRNYNEVVEKQQQKFNKNSNLNAYPSKSAECKPQ 431
            |:.             :|.|..|:.....|:..:     :..:.:||.|                
  Fly   163 PDT-------------SASKGSSEAGSTAHRTCS-----KSDRSQFNTN---------------- 193

  Fly   432 QLTAIGNRLLDWFSVIMADSKKRRQHSQKSKAHFPPACKTEAKWMFGHLDLNNDGQLSLQEMYDL 496
            .:....|....:|          ||.| .|.:|.       .:|.|..||.|.:..|..||:.:|
  Fly   194 LMRMFRNEAQSFF----------RQPS-LSDSHI-------LEWQFSKLDTNGNKLLDRQEIREL 240

  Fly   497 E-----HDQNERCIKPFIDTCDLDTDSSINTREWCRCFEKTDRPCAAVRRRIAGDFAGEIGAYAP 556
            :     :.:..||.:.|...||:..|:::|..||..||.|.....:||...:|..     .|.||
  Fly   241 KKVLRRNVKPRRCGRTFGKYCDVTKDANLNWLEWSVCFTKEFHNRSAVVNLLASS-----AATAP 300

  Fly   557 DCDIQGFYKPTQCHNSVGVCWCVDKHGVEFANTRTRGKPNCESVVNNAASLTSD---DEDEGADD 618
                     |...|.|:        |... .|...||..|......|..|.:.|   .|:...:.
  Fly   301 ---------PHSTHYSI--------HNTN-VNGHHRGHTNTIGTGVNPHSYSEDASGSEEHEDNY 347

  Fly   619 EDSAEG 624
            ||||.|
  Fly   348 EDSATG 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624 11/32 (34%)
EFh_SPARC_TICN 428..533 CDD:320011 28/109 (26%)
EF-hand motif 469..500 CDD:320011 9/35 (26%)
EF-hand motif 501..533 CDD:320011 12/31 (39%)
TY 535..597 CDD:238114 13/61 (21%)
maguNP_610548.2 KAZAL_FS 38..77 CDD:238052 16/53 (30%)
TY 88..139 CDD:238114 12/78 (15%)
EFh_SPARC_SMOC 182..280 CDD:320013 30/136 (22%)
EF-hand motif 213..245 CDD:320013 10/38 (26%)
EF-hand motif 250..280 CDD:320013 11/29 (38%)
TY 396..463 CDD:238114
EFh_SPARC_SMOC 475..577 CDD:320013
EF-hand motif 512..544 CDD:320013
EF-hand motif 549..577 CDD:320013
Blue background indicates that the domain is not in the aligned region.

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