DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cow and zgc:66433

DIOPT Version :10

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001410450.2 Gene:zgc:66433 / 321250 ZFINID:ZDB-GENE-030131-9832 Length:995 Species:Danio rerio


Alignment Length:255 Identity:49/255 - (19%)
Similarity:90/255 - (35%) Gaps:86/255 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 STEARNKKKYVGETGGDFEFIDEINKNTQSNKNLGEHKRWIHDPSSDLCRPLNCKKREICLLEDE 88
            :||.....:::||     |.:::.:.......   |.|| :|:..|        .:.:..|||..
Zfish   481 TTEEEELLEFIGE-----ESVEQSHSQVPEEH---EEKR-VHNAES--------AREDEELLESP 528

  Fly    89 FSAVCVSKKELHKNRDEIITKAKYLEEEAKRRVNQQDNQDSQDAEDINNDDEDNSSDGGSSNSSP 153
            .:.:            :.:.::...|:||:..:  ||..|  |.|  ..||.|:.:||.|.|...
Zfish   529 VAFI------------DNVKESDVTEDEAELEI--QDGGD--DGE--RGDDGDSGNDGDSGNDED 575

  Fly   154 TG------------------TNNAQ-------ASVQGNEETDDEDKSL------SLGDDDESKED 187
            :|                  ||..:       :....|.|..|:::.|      ::.:.|.::.|
Zfish   576 SGNGGDDKLTEVEPEKSEDSTNYVEPQEDKPSSPEPENHEASDDERDLVVLKVENVHEPDHTERD 640

  Fly   188 DVFYENSIAAGDK--------------QQQQQQLSQPAAGPSVIQQDDDEELDNCKPCPV 233
            ||:  .|....|:              .||:..:.|.....|.:...:.||    .|.|:
Zfish   641 DVW--RSTETSDEPEASKSSAVEILVSPQQESPILQCQFSKSSMSSLEKEE----DPLPI 694

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624
EFh_SPARC_TICN 428..533 CDD:320011
EF-hand motif 469..500 CDD:320011
EF-hand motif 501..533 CDD:320011
TY 535..597 CDD:238114
zgc:66433NP_001410450.2 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.