DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cow and Spock1

DIOPT Version :10

Sequence 1:NP_001262857.1 Gene:Cow / 42733 FlyBaseID:FBgn0039054 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_033288.2 Gene:Spock1 / 20745 MGIID:105371 Length:442 Species:Mus musculus


Alignment Length:660 Identity:140/660 - (21%)
Similarity:204/660 - (30%) Gaps:295/660 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIASACL--ALVLMSSSLIGSTEARNKKKYVGETGGDFEFIDEINKNTQSNKNLGEHKRWIHDPS 68
            |...|.|  |..|.:...:.:....::.||......:.|  |:..:|...||...:    ..|||
Mouse    27 LAGGAALNNANFLDNDQWLSTVSQYDRDKYWNRFRDEVE--DDYFRNWNPNKPFDQ----ALDPS 85

  Fly    69 SDLCRPLNCKKREICLLEDEFSAVCVSKKELHKNRDEIITKAKYLEEEAKRRVNQQDNQDSQDAE 133
            .|.|..:.|...::|:.:|..:|:|||:|.|...:                              
Mouse    86 KDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQ------------------------------ 120

  Fly   134 DINNDDEDNSSDGGSSNSSPTGTNNAQASVQGNEETDDEDKSLSLGDDDESKEDDVFYENSIAAG 198
                                                               |:.:|.:::.:   
Mouse   121 ---------------------------------------------------KKGNVAHKHWL--- 131

  Fly   199 DKQQQQQQLSQPAAGPSVIQQDDDEELDNCKPCPVAKPTFLCGADNRTYSSLCRLDYHNCIHSTS 263
                          |||        .|..|||||||:...:||:|..||:|.|:|::|.|....|
Mouse   132 --------------GPS--------NLVKCKPCPVAQSAMVCGSDGHTYTSKCKLEFHACSTGKS 174

  Fly   264 IRIACKGFCPCKEIVDGKRLQRISGYNNKYNKKISLDQQQQQQQQQQQQQQQQQAYKDSNNNNIM 328
            :...|.|.|||..                                                    
Mouse   175 LNSLCDGPCPCLP---------------------------------------------------- 187

  Fly   329 MNSGNIMGGNNNDFNTIMNDKEDNNRHNNHINAQYTFTPEEIKYDNKHYKYLKYTAYKKDSKYQE 393
                                                 .||.:|                      
Mouse   188 -------------------------------------EPEPLK---------------------- 193

  Fly   394 DKHKMRNYNEVVEKQQQKFNKNSNLNAYPSKSAECKPQQLTAIGNRLLDWFSVIMADSKK--RRQ 456
                                      ....||| |..::|..:.:||.|||..:..|:.:  :..
Mouse   194 --------------------------PKAEKSA-CTDKELRNLASRLKDWFGALHEDANRVIKPT 231

  Fly   457 HSQKSKAHFP----PACKTEAKWMFGHLDLNNDGQLSLQEMYDLEHDQNERCIKPFIDTCDLDTD 517
            .|..::..|.    |.||....|||..||:|.|..|...|:..:..|:.|.||||..::||...|
Mouse   232 SSDPAQGRFDTSILPICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKD 296

  Fly   518 SSINTREWCRCFEK-TDRPCAAVRRRIAGDFAGE--IGAYAPDCDIQGFYKPTQCHNSVGVCWCV 579
            ..::..|||.||:| ...||.....||.....|:  :||:.|.|:.:|:||.||||.|.|.||||
Mouse   297 GKLSNNEWCYCFQKPAGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGSTGQCWCV 361

  Fly   580 DKHGVEFANTRTRGKPNCE-------------SVV---------------------NNAASLTSD 610
            ||:|.|.|.:|.:|..:||             |||                     ....::..|
Mouse   362 DKYGNELAGSRKQGTVSCEEEQETSGDFGSGGSVVLLDDLEDERELGPKDKEGKLRVRTRAVRED 426

  Fly   611 DEDEGADDED 620
            ||||..|.||
Mouse   427 DEDEDDDKED 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CowNP_001262857.1 KAZAL <240..272 CDD:197624 13/31 (42%)
EFh_SPARC_TICN 428..533 CDD:320011 37/111 (33%)
EF-hand motif 469..500 CDD:320011 11/30 (37%)
EF-hand motif 501..533 CDD:320011 14/32 (44%)
TY 535..597 CDD:238114 29/63 (46%)
Spock1NP_033288.2 Kazal_2 139..>176 CDD:400135 18/36 (50%)
EFh_SPARC_EC 201..311 CDD:330171 36/109 (33%)
EF-hand motif 248..279 CDD:320009 11/30 (37%)
EF-hand motif 280..310 CDD:320009 13/29 (45%)
TY 315..376 CDD:238114 28/60 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 375..395 3/19 (16%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 420..442 8/17 (47%)

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