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Protein Alignment CG6733 and Cndp2

DIOPT Version :9

Sequence 1:	NP_651123.1	Gene:	CG6733 / 42731	FlyBaseID:	FBgn0039052	Length:	401	Species:	Drosophila melanogaster
Sequence 2:	NP_001276460.1	Gene:	Cndp2 / 66054	MGIID:	1913304	Length:	475	Species:	Mus musculus

Alignment Length:	416	Identity:	80/416 - (19%)
Similarity:	150/416 - (36%)	Gaps:	96/416 - (23%)

- Green bases have known domain annotations that are detailed below.

  Fly    59 PVVIIKWEGSQPELSSIVLNSHTDVVP-VFREKWTHEPFSADIDEEGRIFARGTQDMKSVGTQYL 122
            |.:::...||.|:..::.:..|.||.| ...:.|..|||:. ::.||:::.||:.|.|.....::
Mouse    78 PPILLGKLGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTL-VEREGKLYGRGSTDDKGPVAGWM 141

  Fly   123 GAIRLLKASGFKPKRNLYVTFVPDEETGGHLGMAEFV---KTDYYKKMNAGFSLD---------- 174
            .|:...:.:|.:...||.......||:|.. |:.|.:   |..::|.::.....|
Mouse   142 NALEAYQKTGQEIPVNLRFCLEGMEESGSE-GLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPC 205

  Fly   175 -------------EGATSESDVHHLFYAERLRWGLK--LKVSG--TSGHGSLLLPNTAGVKLNYL 222
                         |...|:.|:|...|...:...:.  :.:.|  ....|.:|:|.     :|..
Mouse   206 ITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLISLMGCLVDKKGKILIPG-----INDA 265

  Fly   223 VNKLTEFRTSQVENLARDSSLSKGDVTTVNLTQ------------------------LSGGVQSN 263
            |..:|:...:..:::..|......||....|..                        .||.....
Mouse   266 VAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFSGSGAKT 330

  Fly   264 VVPPLFEAVFDIRIAITVNVVAFEKQIRDWCEEAGGGIEIDFFQK-EPYIG----PTKLDNSNPY 323
            |:|......|.||:...:......:|:..:..:...  |:....| :.|:|    |...|.::|:
Mouse   331 VIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFA--ELQSPNKFKVYMGHGGKPWVSDFNHPH 393

  Fly   324 WLAVKAAIDEL-GLKVHPIVCPGATDSRFIREKGTPAIGFS------------PIINTTMRIHDH 375
            :.|.:.|:..: |::      |..|     ||.|:..:..:            |:.:.....|..
Mouse   394 YQAGRRALKTVFGVE------PDLT-----REGGSIPVTLTFQEATGKNVMLLPVGSADDGAHSQ 447

  Fly   376 DEFLQADVYLNGIDVYKKIIRNLAEV 401
            :|.|..   ||.|:..|.:...|.||
Mouse   448 NEKLNR---LNYIEGTKMLAAYLYEV 470

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.