DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6733 and Pm20d1

DIOPT Version :10

Sequence 1:NP_651123.1 Gene:CG6733 / 42731 FlyBaseID:FBgn0039052 Length:401 Species:Drosophila melanogaster
Sequence 2:NP_001102538.1 Gene:Pm20d1 / 498226 RGDID:1564063 Length:503 Species:Rattus norvegicus


Alignment Length:461 Identity:110/461 - (23%)
Similarity:178/461 - (38%) Gaps:86/461 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 NNEEIKIFREYL----RIPTV---HPDVDYTACVEFLK--RQASSLNLPVEVVYPAVQTKPVVII 63
            :.||....:|.|    |||||   |.:.:.||..||.:  |:|........::...|..|...::
  Rat    44 SEEERVAMKEALKGAIRIPTVSFSHEESNTTALAEFGEYIRKAFPTVFHSNLIQHEVVGKYSHLL 108

  Fly    64 KWEGSQPELSSIVLNSHTDVVPVFREKWTHEPFSADIDEEGRIFARGTQDMKSVGTQYLGAIRLL 128
            ...||.|.|...:|.:|.||||...|.|...|||. :::.|.|..||..|.|:.....|.|:.||
  Rat   109 TVRGSDPSLQPYMLMAHFDVVPASEEGWEVPPFSG-LEQNGFIHGRGALDNKNSVMAVLQALELL 172

  Fly   129 KASGFKPKRNLYVTFVPDEETGGHLGMAEFVKTDYYKKMNAGFSLDEGATSESD--------VHH 185
            ....:.|||..::....|||..|..|..:.......:.:...|.:|||:....|        ...
  Rat   173 LIRKYSPKRPFFIALGHDEEVSGTKGAQQISALLQTRGVQLAFLVDEGSFILEDFIPNLKKPFAM 237

  Fly   186 LFYAERLRWGLKLKVSGTSGHGSL------------------------------------LLPNT 214
            :...|:....|.|:|:.|.||.|.                                    ||.|.
  Rat   238 ISVTEKGALDLMLQVNMTPGHSSAPPKETSIGILSAAVSRLEQTPMPNMFGNGPLKKTLKLLANE 302

  Fly   215 AGVKLNYLVNKLTEFRTSQVENLARDSSLSKGDVTTVNLTQLSGGVQSNVVPPLFEAVFDIRI-- 277
            .....|.::..|..||......:.|:...:....||..||..:.|::.||:|||.:|..:.||  
  Rat   303 FSFPTNIILGNLWLFRPIVSRVMERNPITNALVRTTTALTMFNAGIKVNVIPPLAQATVNFRIHP 367

  Fly   278 --------AITVNVVAFEKQIRDWCEEAGGGIEIDFFQK-EPY-IGPTKLDNSNPYWL---AVKA 329
                    .:..|:||.::            :::...:. ||. :.|:. |.:..|.|   .:::
  Rat   368 SQTVHEVVELVQNIVADDR------------VQLHVLRSFEPLPVSPSD-DQAMGYQLLQQTIQS 419

  Fly   330 AIDELGLKVHPIVCPGATDSRFIREKGTPAIGFSPII---NTTMRIHDHDEFLQADVYLNGIDVY 391
            ...|:.:.| |.:|.|.||:|...........|:|:.   .....:|..:|.:..:.|.|.:...
  Rat   420 VFPEVKIIV-PGICIGNTDTRHYVNLTNGLYRFNPVFLKPQDFSSVHGINEKISVESYQNQVKFI 483

  Fly   392 KKIIRN 397
            .::|:|
  Rat   484 FELIQN 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6733NP_651123.1 M20_AcylaseI_like 8..399 CDD:349898 110/461 (24%)
Pm20d1NP_001102538.1 M20_yscS 53..488 CDD:349923 106/449 (24%)

Return to query results.
Submit another query.