DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17110 and Pm20d1

DIOPT Version :10

Sequence 1:NP_651121.1 Gene:CG17110 / 42729 FlyBaseID:FBgn0039050 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_835180.2 Gene:Pm20d1 / 212933 MGIID:2442939 Length:503 Species:Mus musculus


Alignment Length:460 Identity:107/460 - (23%)
Similarity:183/460 - (39%) Gaps:94/460 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NDEEIIIFQEYLR----IPSV---HPDVDYTACVEFLK--RQANKLNLRVDVVYPVVPSKPVVIM 65
            ::||.:..:|.|:    ||:|   |.:.:.||..||.:  |:|........:|...|.:|...:.
Mouse    44 SEEERVAIKEALKGAIQIPTVSFSHEESNTTALAEFGEYIRKAFPTVFHSSLVQHEVVAKYSHLF 108

  Fly    66 KWLGKHPELKSIILNSHMDVVPVFPEKWTHEPFGAHIDAQGRIYARGAQDMKSVGCQYMAAVRAL 130
            ...|..|.|:..:|.:|:||||...|.|...||.. ::..|.||.|||.|.|:.....:.|:..|
Mouse   109 TIQGSDPSLQPYMLMAHIDVVPAPEEGWEVPPFSG-LERNGFIYGRGALDNKNSVMAILHALELL 172

  Fly   131 KASGYQPKRTVYLTFVPDEETGGHMGMAEFVKGDYFKAMNVGFSLDEGIASEDDTYP-------- 187
            ....|.|||:.::....|||..|..|..:.......:.:.:.|.:|||....:...|        
Mouse   173 LIRNYSPKRSFFIALGHDEEVSGEKGAQKISALLQARGVQLAFLVDEGSFILEGFIPNLEKPVAM 237

  Fly   188 VFYAERTLWQLRFKFSGTSGHGSLLHKSTAGEKFHFVMDKLMK-----------FRETQVKLLAE 241
            :...|:....|..:.:.|.||.|...|.|:.......:.:|.:           .::| :||||.
Mouse   238 ISVTEKGALDLMLQVNMTPGHSSAPPKETSIGILSAAVSRLEQTPMPNMFGGGPLKKT-MKLLAN 301

  Fly   242 DSSLQSGDV--------------------------TTLNLTQLNGGVQSNVVPPVLEATFDIRI- 279
            :.|.....|                          ||..||..|.|::.||:||:.:||.:.|| 
Mouse   302 EFSFPINIVLRNLWLFHPIVSRIMERNPITNALVRTTTALTMFNAGIKVNVIPPLAQATINCRIH 366

  Fly   280 ---AINQNADAMENQIREWCNEVGGGVELDFTLKCPSVVTKIDDSNPYWLGF-------KKGLDE 334
               .:::..:.::|.:.:  :.|...|...|.   |..::..||..   :|:       :....|
Mouse   367 PSQTVHEVLELVKNTVAD--DRVQLHVLRSFE---PLPISPSDDQA---MGYQLLQETIRSVFPE 423

  Fly   335 LGLI--------THTRVFPGATDSFY-VRQVGIPALGFSPIN--NTPVLLHNHDEYLR------- 381
            :.::        |.||.:...|:..| ...:.:....||.::  |..|.:.|:...::       
Mouse   424 VDIVVPGICIANTDTRHYANITNGMYRFNPLPLNPQDFSGVHGINEKVSVQNYQNQVKFIFEFIQ 488

  Fly   382 -ADTY 385
             ||||
Mouse   489 NADTY 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17110NP_651121.1 M20_AcylaseI_like 10..400 CDD:349898 107/460 (23%)
Pm20d1NP_835180.2 M20_yscS 53..488 CDD:349923 101/444 (23%)

Return to query results.
Submit another query.