DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17111 and qsm

DIOPT Version :10

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_652049.1 Gene:qsm / 47065 FlyBaseID:FBgn0028622 Length:414 Species:Drosophila melanogaster


Alignment Length:381 Identity:84/381 - (22%)
Similarity:141/381 - (37%) Gaps:99/381 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   351 RVFCTRDEMTIKY-----NPKDWFVGKIY----ASMHSKDCLARGSGNGSVL-LTLQIGSEVKEN 405
            :|.|:.|:|.:..     ..||....:||    .....:.|..:..|:.:|. |:|   |:..| 
  Fly    28 KVHCSEDQMRVDIGLPDAESKDQSAPQIYLEGLKGYPDERCQPQIDGSLAVFRLSL---SDFYE- 88

  Fly   406 RCGILR-AYEMTQE---YQRTFISALVVIQNNPNVQTQGDRLIKVGCIQS---------NATTSL 457
             ||:.| ..::|.:   |.:..|.:           |.|..::.|.||.:         ||||. 
  Fly    89 -CGVTRMVNQLTGKKVYYHKIIIES-----------TSGKEIVSVKCITTASPAYNVMMNATTG- 140

  Fly   458 GVSVRDSSVDSS----------EPVPSAIALESSLEYTEHMFPHEGVVHYNSSTGPHPHPSISLQ 512
                 .||..:|          :.:|:.......||.|            .|.|...|.|.:|:.
  Fly   141 -----SSSTSTSSGGIHGLVKRDVLPAGFQEPEDLEIT------------TSLTKRAPEPRLSIG 188

  Fly   513 ILDLSHQHETND--VQIGQNLELQIVAEYSPQQLAEHMELQLAPLPDFRATSLVAKTADNENFVL 575
            : ....|..|.|  |:.|..|.::|           :::...||:.......|........:..|
  Fly   189 V-SQDGQKFTRDLTVKSGTPLTMEI-----------NLDEDSAPVYGLGVNYLDVTDTHTSSETL 241

  Fly   576 LIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIRFCVERCSPSNCISS- 639
            :.  :||..|..:|   |..:|....:|.|:|.||||..::.|.|...:..|:::|..:.|.:: 
  Fly   242 IF--KGCTVDPYLF---ENFNTIDGDILSAKFKAFKFPDSSYVQFRATVNVCLDKCLGTQCSNNQ 301

  Fly   640 -SWQRRRRQADQPDRRPEDLRVQNPVY-ISTVVDVAPQPDNFTRSQEELPLNYNIR 693
             .:.||:|          ::...|.|| ||..:.:..|........|.|.|...:|
  Fly   302 VGFGRRKR----------EISSANKVYEISLAMFLQVQDIEGVNKNEVLQLEEKLR 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:459635
PAN_AP_HGF 270..344 CDD:238532
ZP <566..627 CDD:214579 16/60 (27%)
qsmNP_652049.1 ZP 30..298 CDD:214579 69/318 (22%)
Blue background indicates that the domain is not in the aligned region.

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