DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17111 and neo

DIOPT Version :9

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_651733.1 Gene:neo / 43523 FlyBaseID:FBgn0039704 Length:744 Species:Drosophila melanogaster


Alignment Length:800 Identity:167/800 - (20%)
Similarity:272/800 - (34%) Gaps:224/800 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 NRIYGPEMVSNFKTRNGQQELP--------------------------------------VSQVC 87
            ||...|  |.|.:|||...:||                                      |....
  Fly    69 NRTERP--VENVETRNSGFDLPAASDLSSSLGSEEDSIYYDNAPVDCNPELVGFEIVTGYVFSAP 131

  Fly    88 WRICNEDPDCIAYVHLLDT----DECHGYSY-------FERTSRYL---AISGELPLVADGEAVF 138
            .::.:..|..:.....|||    ..|...:|       |...:..|   ....:.|:.    .::
  Fly   132 EKLMDSQPGTLMLTDCLDTCRKNKTCQSVNYETGLCVLFSAHADQLPGALTKSQFPVF----TIY 192

  Fly   139 YEKTCLRVPDACRGRLWALTKIPGSTLVYHSKKTISTLVTRRECAERCFFETQFRCLSASFAPSY 203
            .:|:||.|...  .|.|.:.::....|....|:|:| :.:||||.|.|..|..|.|.||::    
  Fly   193 AQKSCLAVKPC--SRAWYVDRVQNYKLKTEVKRTVS-VASRRECFELCLGENDFTCRSANY---- 250

  Fly   204 RNNRERFRGEAGPGQRPSPRLGRCMLSDRDK--TVQPDAFRAAPYDEEYMENQCHERAIESDN-- 264
                          .|.|   |.|.||:.|:  .....||:... ..:|:||.|    ::..|  
  Fly   251 --------------DRTS---GACELSELDRLTLAGSQAFQVND-GSDYLENHC----VDEPNKL 293

  Fly   265 CSYE-----LYANSSFIYAEARYLGLSQKECQAMCSHEAKFYCQGVSFYYVNQLSLSECLL--HS 322
            |.::     :......:|.|..    |..||:.:|.: :.:.|..   |..|......|.|  ||
  Fly   294 CEFKRLPGRILKTVDSVYQEVS----SIDECRELCLN-SPYRCHS---YDYNDTGDMVCRLSHHS 350

  Fly   323 E-DIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKDWFVGKIYASMHSKDCLARG 386
            . .:..:....|::.|.|.| ....|.:|.:.|...:|..:......|.||:||....|.|    
  Fly   351 RATLADVQEPFLEVPEASTY-ELTSCYNVTIECGGGDMLARIRTSKLFNGKVYAKGSPKSC---- 410

  Fly   387 SGNGSVLLTLQIGSEVKEN----RCGILRAYEMTQEYQRTFISALVVIQNNPNVQTQGDRLIKVG 447
                ||.:...:..|::.|    .|.:      .|.....:::. ::||::..:.|..|..:.:.
  Fly   411 ----SVDVKSALDFELRMNYHDLECNV------RQSTAGRYVND-IIIQHHDMIVTSSDLGLALA 464

  Fly   448 CIQ--SNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEGVVHYNSSTGPHPHPSIS 510
            |..  :|.:.|.||.: |...|....:...:.:||                          |::.
  Fly   465 CQYDLTNKSVSNGVDL-DVRGDIMPALSEEVIVES--------------------------PNVI 502

  Fly   511 LQILDLSHQHETNDVQIGQNLEL--QIVAEYSPQQLAEHMELQLAPLPDFRATSLVAKTADNENF 573
            ::|............::|..|.|  :||.|.||.::.              ...|||....:.:.
  Fly   503 MRITSRDGSDMMRSAEVGDPLALKFEIVDEQSPYEIF--------------IRELVAMDGVDNSE 553

  Fly   574 VLLIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVKIRFCVERCSPSNCIS 638
            :.|||..|||||..:...:.: .:.|..||.:.|.||||..:..|.|...:..|:..|.|..|..
  Fly   554 ITLIDSNGCPTDHFIMGPIYK-GSVSGKMLLSNFDAFKFPSSEVVQFRALVTPCMPSCEPVQCEQ 617

  Fly   639 S----------SWQRRRRQADQPDRRPEDLRVQNPVYISTVVDVAPQ----------PDNFTRSQ 683
            .          |:.|:||..:..|..|...|     .|.|....||.          .|.|...|
  Fly   618 EDTSGEFRSLLSYGRKRRSLNTTDDHPRPRR-----DIDTSKKSAPSDMLLVQSIQITDKFGFKQ 677

  Fly   684 EELPLNYNIRVHGPD--QSNTNSYLYGERGVLLIAGIDDPLHLDNVCINQSLLIALFIFWLICQV 746
            :        :....|  ..|..::...|.|             ...|:|...||.....:|:.|:
  Fly   678 D--------KQESGDFYDGNETTFTANEEG-------------HGFCVNAIGLITAATIFLLTQL 721

  Fly   747 ALLFGCGMVLQRYRRLAKLE 766
            |::   .:....|:|..||:
  Fly   722 AVI---AIWTYCYQRRQKLQ 738

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:278453 27/97 (28%)
PAN_AP_HGF 270..344 CDD:238532 17/76 (22%)
neoNP_651733.1 PAN_1 120..197 CDD:278453 11/80 (14%)
PAN_AP_HGF 211..285 CDD:238532 26/96 (27%)
PAN_1 294..373 CDD:278453 18/87 (21%)
ZP 381..615 CDD:214579 62/290 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005301
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.910

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