DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17111 and pio

DIOPT Version :10

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_726461.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster


Alignment Length:481 Identity:103/481 - (21%)
Similarity:176/481 - (36%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 QLSLSECLLHSE-DIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKD----WFVG 371
            |.|||:.:..:| ::.|....::   |.||   |:|||...:.     :|||..|.:    .|.|
  Fly    37 QSSLSDAIAAAEAEVASTSKPAV---EPSV---RIKCLSGSML-----ITIKDAPPNHETGLFSG 90

  Fly   372 KIYASMHSKD--CLARGSGN-GSVLLTLQIGSEVKENRCGILRAYEMTQEYQRTFISALVVIQNN 433
            .||....||:  ||:....: ||:...|.:.|      |..:.  :.|.:....|.:. :|:|.:
  Fly    91 MIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRS------CNTMP--KETDDGGIEFFNT-IVLQPH 146

  Fly   434 PNVQTQGDRLIKVGCIQSNATTSLGVSVRDSSVDSSEPV------PSAIALESSLEYTEHM---- 488
            ..:.|...|...|.|...:         ||:::...:.:      |.|...:...||...:    
  Fly   147 LKLITDLGRGYHVRCAYKS---------RDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQ 202

  Fly   489 ---FPHEGVVHYNSSTGPH-------PHPSISLQILDLSHQHETNDVQIGQNLELQIVAEYSPQQ 543
               ...|.|...|:.|...       |.|...::|.:..|: ..:||:||.  .|.||.....|:
  Fly   203 DDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHK-IADDVKIGD--PLTIVISIDKQK 264

  Fly   544 LAEHMELQLAPLPDFRATSLVAKTADNENFVLLIDERGCPTDASVFPALERVHTASRSMLRARFH 608
            :.           ....|..:.:.........|:.|.|||.|..:.....  :|..|......|.
  Fly   265 VY-----------GLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFN--YTQDRLAANVTFP 316

  Fly   609 AFKFSGTANVSFDVKIRFCV---ERCSPSNCISSSWQRRRRQAD--QPDRRPEDLRVQNPVYIST 668
            |.||..|.:|.:...:|.|.   ..|..:...|....:|:..||  :.|..|..:.|.:.:|:: 
  Fly   317 AHKFPYTTSVYYQCNVRLCALEDPTCQEAPQCSGKRPKRQAAADSKEEDGLPATIEVFSGLYVN- 380

  Fly   669 VVDVAPQPDNFTRSQEELPLNYNIRVHGPDQSNTNSYLYGERGVLLIAGIDDPLHLDNVCINQ-S 732
                  :.:|...|.|:.                   :|.|:      .:||.|     |::| :
  Fly   381 ------ENENANDSDEDA-------------------VYKEK------TLDDAL-----CVSQRT 409

  Fly   733 LLIALFIFWLICQVALLFGCGMVLQR 758
            ..||:.|..||..:|::.....::.|
  Fly   410 FAIAIAIAGLILMLAVVAAVLCIMAR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:459635
PAN_AP_HGF 270..344 CDD:238532 9/32 (28%)
ZP <566..627 CDD:214579 15/60 (25%)
pioNP_726461.1 ZP 66..349 CDD:214579 68/321 (21%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.