DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17111 and pio

DIOPT Version :9

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_001163295.1 Gene:pio / 37929 FlyBaseID:FBgn0020521 Length:462 Species:Drosophila melanogaster


Alignment Length:481 Identity:103/481 - (21%)
Similarity:176/481 - (36%) Gaps:116/481 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   312 QLSLSECLLHSE-DIVSLGPRSLKLRENSVYMRRVKCLDVRVFCTRDEMTIKYNPKD----WFVG 371
            |.|||:.:..:| ::.|....::   |.||   |:|||...:.     :|||..|.:    .|.|
  Fly    37 QSSLSDAIAAAEAEVASTSKPAV---EPSV---RIKCLSGSML-----ITIKDAPPNHETGLFSG 90

  Fly   372 KIYASMHSKD--CLARGSGN-GSVLLTLQIGSEVKENRCGILRAYEMTQEYQRTFISALVVIQNN 433
            .||....||:  ||:....: ||:...|.:.|      |..:.  :.|.:....|.:. :|:|.:
  Fly    91 MIYPKGLSKNSTCLSEYRDHVGSLRYKLPLRS------CNTMP--KETDDGGIEFFNT-IVLQPH 146

  Fly   434 PNVQTQGDRLIKVGCIQSNATTSLGVSVRDSSVDSSEPV------PSAIALESSLEYTEHM---- 488
            ..:.|...|...|.|...:         ||:::...:.:      |.|...:...||...:    
  Fly   147 LKLITDLGRGYHVRCAYKS---------RDAAMKPKKYLRKHAQKPQAFRSDDRREYGRSLDKQQ 202

  Fly   489 ---FPHEGVVHYNSSTGPH-------PHPSISLQILDLSHQHETNDVQIGQNLELQIVAEYSPQQ 543
               ...|.|...|:.|...       |.|...::|.:..|: ..:||:||.  .|.||.....|:
  Fly   203 DDDLDEEDVYDANAPTQEEDVTNNEIPMPGCHMKIYNDEHK-IADDVKIGD--PLTIVISIDKQK 264

  Fly   544 LAEHMELQLAPLPDFRATSLVAKTADNENFVLLIDERGCPTDASVFPALERVHTASRSMLRARFH 608
            :.           ....|..:.:.........|:.|.|||.|..:.....  :|..|......|.
  Fly   265 VY-----------GLHVTDCIVRDGLGWGEQRLVGEDGCPMDNEIMGQFN--YTQDRLAANVTFP 316

  Fly   609 AFKFSGTANVSFDVKIRFCV---ERCSPSNCISSSWQRRRRQAD--QPDRRPEDLRVQNPVYIST 668
            |.||..|.:|.:...:|.|.   ..|..:...|....:|:..||  :.|..|..:.|.:.:|:: 
  Fly   317 AHKFPYTTSVYYQCNVRLCALEDPTCQEAPQCSGKRPKRQAAADSKEEDGLPATIEVFSGLYVN- 380

  Fly   669 VVDVAPQPDNFTRSQEELPLNYNIRVHGPDQSNTNSYLYGERGVLLIAGIDDPLHLDNVCINQ-S 732
                  :.:|...|.|:.                   :|.|:      .:||.|     |::| :
  Fly   381 ------ENENANDSDEDA-------------------VYKEK------TLDDAL-----CVSQRT 409

  Fly   733 LLIALFIFWLICQVALLFGCGMVLQR 758
            ..||:.|..||..:|::.....::.|
  Fly   410 FAIAIAIAGLILMLAVVAAVLCIMAR 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:278453
PAN_AP_HGF 270..344 CDD:238532 9/32 (28%)
pioNP_001163295.1 ZP 66..349 CDD:214579 68/321 (21%)
Zona_pellucida <248..349 CDD:278526 25/115 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45473245
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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