DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17111 and noah-2

DIOPT Version :9

Sequence 1:NP_651119.2 Gene:CG17111 / 42727 FlyBaseID:FBgn0039048 Length:792 Species:Drosophila melanogaster
Sequence 2:NP_502699.1 Gene:noah-2 / 178365 WormBaseID:WBGene00009926 Length:741 Species:Caenorhabditis elegans


Alignment Length:845 Identity:174/845 - (20%)
Similarity:299/845 - (35%) Gaps:250/845 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 ILLILQLNASVALLLKCPLHQLQLQKIVGF-RPPLEYLNADNRIYGPEMVSNFKTRNGQQELPVS 84
            |.|:|.:..:...:.:|..|:     ...| |.|...|:..     |.::|     ....:|..:
 Worm     5 IFLLLSIVPAAQSVFECSSHE-----TTAFVRIPRARLDGT-----PVVIS-----TAGHDLTCA 54

  Fly    85 QVCWRICNEDPDCIAYVHLLDTDECHGYSYFERTSRYL-----AISGELPLVADGEA--VFYEKT 142
            |.|..  |.:|...|      ...|..:::..|.:.|.     ..:|...|.|:..|  .:||||
 Worm    55 QYCRN--NIEPTTGA------QRVCASFNFDGRETCYFFDDAATPAGTSQLTANPSANNFYYEKT 111

  Fly   143 CL---RVPDACRGRLWALTKIPGSTLVYHSKKTISTLVTRRECAERCFFETQFRCLSASF----- 199
            |:   ...:||..|.::..:...:.|....||:: |:..|..|...|..|.:|.|.|.:|     
 Worm   112 CIPNVSAHEACTYRSFSFERARNTQLEGFVKKSV-TVENREHCLSACLKEKEFVCKSVNFHYDTS 175

  Fly   200 -----------APS----------YRNNRERFRGEAGPG-------------------------- 217
                       .|:          |.||....:...||.                          
 Worm   176 LCELSVEDKRSKPTHVRMSEKIDYYDNNCLSRQNRCGPSGGNLVFVKTTNFEIRYYDHTQSVEAQ 240

  Fly   218 -----QRP-------------SPRLGRCMLSDRDKTVQPDAFRAAPYDEEYMENQCHERAIESDN 264
                 |:.             :|:...|::||.|...:.|. :.....::|.|..|....:.|..
 Worm   241 ESYCLQKCLDSLNTFCRSVEFNPKEKNCIVSDEDTFSRADQ-QGQVVGKDYYEPICVAADLSSST 304

  Fly   265 C----SYELYANSSF---IYAEARYLGLSQKECQAMCSHEAKFYCQGVSFYYVNQLSLSECLLHS 322
            |    ::|.:..||.   :.|.|:  |::..:|.::|.....  |:.:::    ..:.|.|.:: 
 Worm   305 CRQQAAFERFIGSSIEGEVVASAQ--GVTISDCISLCFQNLN--CKSINY----DRTASSCFIY- 360

  Fly   323 EDIVSLGPRSLKLREN-SVYMRRVKC---LDVRVFCTRDEMTIKYNPKDWFVGKIYASMHSKDCL 383
                ::|.:...::.| |:......|   ......||.:.:....|.|:.:.|.|||:.....| 
 Worm   361 ----AVGRQDANIKANPSMDYYEFNCESQFGGMALCTNEGIRFIVNTKEPYTGAIYAAERFSTC- 420

  Fly   384 ARGSGNGSVLLTLQIGSEVKENR---------------CG-ILRAYEMTQEYQRTFISALVVIQN 432
                            |:|.||.               || ::|..:|         .||||:..
 Worm   421 ----------------SQVVENAKQISITFPPPTVSSDCGTVIRDGKM---------EALVVVSL 460

  Fly   433 N---PN-VQTQGDRLIKVGCIQSNATTSLGVSVRDSSVDSSEPVPSAIALESSLEYTEHMFPHEG 493
            :   |: |.|:.||..:|.|     ..|:...|::.||     |.:.| .|:|.:.|..:     
 Worm   461 DGVLPHQVTTEWDRFYRVSC-----DVSMDKMVKEGSV-----VVTTI-YEASSQNTTVL----- 509

  Fly   494 VVHYNSSTGPHPHPSISLQILDLSHQHETNDVQIGQNLELQIVAEYSPQQLAEHMELQLAPLPDF 558
                  .....|..|..||||: ..:...:...||..|.|.|.:|    |...|..:    :.:.
 Worm   510 ------DVATPPPVSAELQILN-QLEEPLHKASIGDPLLLVITSE----QAGPHNMM----VTEC 559

  Fly   559 RATSLVAKTADNENFVLLIDERGCPTDASVFPALERVHTASRSMLRARFHAFKFSGTANVSFDVK 623
            .||. |....|...|.|:  |.|||...::...:|:....:|  |::...||:..|:.:|.....
 Worm   560 TATR-VGGFGDTVPFTLI--ENGCPRYPALVGPVEQDFDKNR--LKSDLRAFRLDGSYDVQIVCS 619

  Fly   624 IRFCV--ERCSPSNCISS-------SWQRRRRQADQPDRRPEDLRVQNPVYISTVVDVAPQPDNF 679
            |.||.  ..|..|||:.|       |..|::|.||......|:       .:|.::.|..:.:: 
 Worm   620 IMFCAGPNGCPVSNCLDSGTNELFMSHGRKKRSADLEAGETEE-------KLSAIIRVFAKGED- 676

  Fly   680 TRSQEELPLNYNIRVHGPDQSNTNSYLYGERGVLLIAGIDDPLHLDNV------CINQSLLIALF 738
               :||:.:..|..:.....|..         :|.||   :|..:.:|      |...|.:||::
 Worm   677 ---EEEMEMANNTMMTSMSDSTE---------LLCIA---EPFFVSSVVSLSVLCFALSAIIAIW 726

  Fly   739  738
             Worm   727  726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17111NP_651119.2 PAN_1 159..255 CDD:278453 27/165 (16%)
PAN_AP_HGF 270..344 CDD:238532 13/77 (17%)
noah-2NP_502699.1 PAN_1 28..112 CDD:278453 22/101 (22%)
PAN_AP_HGF 125..203 CDD:238532 15/78 (19%)
PAN_AP_HGF 217..292 CDD:238532 8/75 (11%)
PAN_1 310..382 CDD:278453 14/84 (17%)
ZP 392..634 CDD:214579 73/303 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_28JEZ
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D200714at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR47327
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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