DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ublcp1 and TIM50

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_175986.2 Gene:TIM50 / 842040 AraportID:AT1G55900 Length:376 Species:Arabidopsis thaliana


Alignment Length:284 Identity:54/284 - (19%)
Similarity:97/284 - (34%) Gaps:73/284 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 EIFRKTQV-RPERQKLLNLKYKGKTAADNVKISALELKPNFKLMMVGSTEADIEDACSLPDNIGE 96
            |:..||:. |....|...:|..|....|..:...      :...|.||..| |:....|.:.:.|
plant   109 EVNEKTKAFRESATKTPVIKSSGIDVIDKYQTKL------YSAAMTGSARA-IDKYLELREIVEE 166

  Fly    97 VVDDFDDADEREESVEHSAVYLAKVQRRVRDYKIKELAPPREGKKLLVLDIDYTLFDHRSPAETG 161
            .|..|.:.                    :.:..:.:|.|..:....||||::.||.......|.|
plant   167 QVKGFTEP--------------------LSEKLLPDLHPAEQHVFTLVLDLNETLLYTDWKRERG 211

  Fly   162 -TELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMI----- 220
             ....||.:..||....:.|:||::|.      :.:|.:|.|...        ||....|     
plant   212 WRTFKRPGVDAFLEHLGKFYEIVVYSD------QMEMYVLPVCEK--------LDPNGYIRYKLA 262

  Fly   221 --------SVHVPERGVVDVKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAH 277
                    ..|..:...::..|..:::.....:.|:             :.|::.:.|:|::.  
plant   263 RGATKYENGKHYRDLSKLNRDPKKILFVSANAFEST-------------LQPENSVPIKPYKL-- 312

  Fly   278 LNRGTDTELLKLSDYLRKIAHHCP 301
              ...||.|:.|..:|..:|.:.|
plant   313 --EADDTALVDLIPFLEYVARNSP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511 9/46 (20%)
HAD_IIID1 120..314 CDD:131299 37/196 (19%)
TIM50NP_175986.2 NIF 191..338 CDD:397254 35/175 (20%)

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