DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ublcp1 and ublcp1

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001002319.1 Gene:ublcp1 / 792145 ZFINID:ZDB-GENE-040718-3 Length:318 Species:Danio rerio


Alignment Length:317 Identity:198/317 - (62%)
Similarity:241/317 - (76%) Gaps:4/317 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VVVIVKWSGKEYPVD-LTDQDTVEVLRHEIFRKTQVRPERQKLLNLKYKGKTAADNVKISALELK 69
            |.||:||.|:||.:: |:::|||..|:..|...|.|.|||||||.||.|||.|.||||:..|:||
Zfish     3 VSVIIKWGGQEYSINTLSEEDTVLDLKQSIKSLTGVLPERQKLLGLKLKGKPADDNVKLGDLKLK 67

  Fly    70 PNFKLMMVGSTEADIEDACSLPDNIGEVVDDFDDADEREESVEHSAVYLAKVQRRVRDYKIKELA 134
            ||.|:||:|:.|..:||..:.|....:||:|||..:|..| ||:....|||:.|||:|||::||.
Zfish    68 PNTKIMMMGTREESLEDVLAPPPENDDVVNDFDIEEEVTE-VENREENLAKIARRVKDYKVEELN 131

  Fly   135 PPREGKKLLVLDIDYTLFDHRSPAETGTELMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRL 199
            |||.||:|||||||||||||:|.||||.|||||:|||||||||||:||||||||||:||:.||:.
Zfish   132 PPRPGKRLLVLDIDYTLFDHKSCAETGHELMRPFLHEFLTSAYEDFDIVIWSATSMKWIDAKMKE 196

  Fly   200 LGVASNDNYKVMFYLDSTAMISVHVPERGVVDVKPLGVIWALYKQ-YNSSNTIMFDDIRRNFLMN 263
            |||..|.|||:.|.|||.|||:||.|:||||:||||||||..|.: ||..||||||||.||||||
Zfish   197 LGVTDNPNYKITFMLDSAAMITVHTPKRGVVEVKPLGVIWGKYSEFYNRKNTIMFDDIGRNFLMN 261

  Fly   264 PKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLNHRKWEHYHPKKNS 320
            |::|||||||.:|||||..|.||.|||.||::|| ...||:.|||:.||.|..||.:
Zfish   262 PQNGLKIRPFMKAHLNREKDKELYKLSQYLKEIA-KLDDFSGLNHKHWERYLSKKQN 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511 37/67 (55%)
HAD_IIID1 120..314 CDD:131299 138/194 (71%)
ublcp1NP_001002319.1 Ubl_UBLCP1 3..77 CDD:340511 41/73 (56%)
HAD_IIID1 117..311 CDD:131299 138/194 (71%)

Return to query results.
Submit another query.