DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ublcp1 and ctdnep1a

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_001007310.1 Gene:ctdnep1a / 492343 ZFINID:ZDB-GENE-041114-177 Length:245 Species:Danio rerio


Alignment Length:242 Identity:50/242 - (20%)
Similarity:87/242 - (35%) Gaps:84/242 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 VQRRVRDYKIKELAPPREG------KKLLVLDIDYTLF-DH-----RSPAETGTE---------- 163
            :|.:...|.|..|:|....      :|:||||:|.||. .|     |.....||.          
Zfish    37 IQYQTVRYDILPLSPISRNRLNAVKRKILVLDLDETLIHSHHDGVLRPTVRPGTPPDFILKVVID 101

  Fly   164 --------LMRPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVMFYLDSTAMI 220
                    ..||::..||....:.|::|:::|:        |.:.|.|..|.      ||:    
Zfish   102 KHPVRFFVHKRPHVDFFLEVVSQWYELVVFTAS--------MEIYGSAVADK------LDN---- 148

  Fly   221 SVHVPERGVVD---------------VKPLGVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKI 270
                 .||::.               :|.|.|:.:     :.|:.::.|:....:..:|.:.:.|
Zfish   149 -----NRGILKRRYYRQHCTLDLGSYIKDLSVVHS-----DLSSIVILDNSPGAYRSHPDNAIPI 203

  Fly   271 RPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSL------NHRKW 311
            :.:    .:..:||.||.|...|..: ....|..|:      .||.|
Zfish   204 KSW----FSDPSDTALLNLLPMLDAL-RFTSDVRSVLSRNLHQHRLW 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511
HAD_IIID1 120..314 CDD:131299 50/242 (21%)
ctdnep1aNP_001007310.1 HIF-SF_euk 62..230 CDD:274055 40/200 (20%)
Blue background indicates that the domain is not in the aligned region.

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