DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ublcp1 and CG12078

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_647795.2 Gene:CG12078 / 38401 FlyBaseID:FBgn0035426 Length:253 Species:Drosophila melanogaster


Alignment Length:246 Identity:46/246 - (18%)
Similarity:87/246 - (35%) Gaps:87/246 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 YLAKVQRRVRDYK----IKE--LAPPRE------GKKLLVLDIDYTL------------------ 151
            :|.||.|...:|.    :.|  |:|..:      .:|.||||:|.|:                  
  Fly    35 FLEKVYRVFVEYTPIIYLSEDRLSPVSKSRLSLVARKTLVLDMDNTMITSWFIKRGKKPKNIPRI 99

  Fly   152 ---FDHRSPAETGTELM--RPYLHEFLTSAYEDYDIVIWSATSMRWIEEKMRLLGVASNDNYKVM 211
               |....||...|..:  ||||..||....:.||:.::::.:..:..              .::
  Fly   100 AHDFKFYLPAYGATIYVYKRPYLDHFLDRVSKWYDLTVFTSGAEIYAS--------------PIL 150

  Fly   212 FYLDSTAMISVHVPERGVVDVKPLGVIWALYKQY-----------------NSSNTIMFDDIRRN 259
            .:||.         .||:::.:       ||:|:                 :.||.::.|:....
  Fly   151 DFLDR---------GRGILNSR-------LYRQHCIEQFGKWSKSVLLACPDLSNVVLLDNSSTE 199

  Fly   260 FLMNPKSGLKIRPFR-----QAHLNRGTDTELLKLSDYLRKIAHHCPDFNS 305
            ...|.::.:.|:.:.     :|.:|.....:.|:....:|.:...|..|.|
  Fly   200 CSFNAENAILIKSYEIGCRDEALINLLPFLDALRFMKDVRSMLKRCTRFES 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511
HAD_IIID1 120..314 CDD:131299 45/243 (19%)
CG12078NP_647795.2 HIF-SF_euk 70..237 CDD:274055 34/196 (17%)
Blue background indicates that the domain is not in the aligned region.

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