DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ublcp1 and Ctdsp1

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:XP_063123456.1 Gene:Ctdsp1 / 363249 RGDID:1305629 Length:265 Species:Rattus norvegicus


Alignment Length:177 Identity:35/177 - (19%)
Similarity:71/177 - (40%) Gaps:42/177 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   128 YKIKELAPPREGKKLLVLDIDYTLFDHRS-----------PAETG------TELMRPYLHEFLTS 175
            |.:.|:......|..:|:|:|.||. |.|           |.|..      ..|.||::.|||..
  Rat    78 YLLPEVKAQDSDKICVVIDLDETLV-HSSFKPVNNADFIIPVEIDGVVHQVYVLKRPHVDEFLQR 141

  Fly   176 AYEDYDIVIWSATSMRWIEEKMRLLGVASNDN---YKVMFYLDSTAMISVHVPERG--VVDVKPL 235
            ..|.::.|:::|:..::.:....||     |.   ::...:.:|.      |..||  |.|:..|
  Rat   142 MGELFECVLFTASLAKYADPVADLL-----DKWGAFRARLFRESC------VFHRGNYVKDLSRL 195

  Fly   236 GVIWALYKQYNSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGT 282
            |        .:....::.|:...:::.:|.:.:..:..::...::.|
  Rat   196 G--------RDLRRVLILDNSPASYVFHPDNAVSTQETQRLRHDQST 234

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511
HAD_IIID1 120..314 CDD:131299 35/177 (20%)
Ctdsp1XP_063123456.1 None
Blue background indicates that the domain is not in the aligned region.

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