DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ublcp1 and ctdsp2

DIOPT Version :10

Sequence 1:NP_651118.1 Gene:Ublcp1 / 42726 FlyBaseID:FBgn0027526 Length:320 Species:Drosophila melanogaster
Sequence 2:NP_955838.1 Gene:ctdsp2 / 321465 ZFINID:ZDB-GENE-030131-184 Length:258 Species:Danio rerio


Alignment Length:192 Identity:47/192 - (24%)
Similarity:82/192 - (42%) Gaps:56/192 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 EGKKLLVLDIDYTLFDHRS-----------PAE-TGTE-----LMRPYLHEFLTSAYEDYDIVIW 185
            :||..:|:|:|.||. |.|           |.| .||.     |.|||:.|||....|.::.|::
Zfish    86 QGKICVVIDLDETLV-HSSFKPISNADFIVPVEIEGTTHQVYVLKRPYVDEFLQRMGELFECVLF 149

  Fly   186 SATSMRWIEEKMRLL---GVASNDNYKVMFYLDSTAMISVHVPERG--VVDVKPLGVIWALYKQY 245
            :|:..::.:....||   ||     ::...:.:|....      :|  |.|:..||  ..|:|  
Zfish   150 TASLAKYADPVTDLLDQCGV-----FRTRLFRESCVFY------QGCYVKDLSRLG--RELHK-- 199

  Fly   246 NSSNTIMFDDIRRNFLMNPKSGLKIRPFRQAHLNRGTDTELLKLSDYLRKIAHHCPDFNSLN 307
                |::.|:...:::.:|::.:.:..:    .:...|||||          |..|.|..|:
Zfish   200 ----TLILDNSPASYIFHPENAVPVLSW----FDDSEDTELL----------HLIPVFEELS 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ublcp1NP_651118.1 Ubl_UBLCP1 12..79 CDD:340511
HAD_IIID1 120..314 CDD:131299 47/192 (24%)
ctdsp2NP_955838.1 HIF-SF_euk 88..247 CDD:274055 46/190 (24%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.