DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ctns and ctns

DIOPT Version :10

Sequence 1:NP_651116.1 Gene:Ctns / 42723 FlyBaseID:FBgn0039045 Length:397 Species:Drosophila melanogaster
Sequence 2:NP_001018407.1 Gene:ctns / 553594 ZFINID:ZDB-GENE-050522-352 Length:384 Species:Danio rerio


Alignment Length:392 Identity:182/392 - (46%)
Similarity:244/392 - (62%) Gaps:25/392 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 THRLTTLLLLLLATVALGN---AQSSQLTVD-----SHDITVLLNS--NETFLVFANGLLDSDVE 59
            |..|..|.|.|....|.|:   |.|:..||:     |.:||:.|:|  |.:..|:.|...:|: .
Zfish     5 TFFLFLLTLYLCKHTAFGDPEVAVSAPATVNLQEFSSENITITLSSPLNTSVTVYFNITYESN-N 68

  Fly    60 VALGTDSEDHLLLDPATFVYPAGSTRNQSVVITGLKAGNVKVVADSDDANKEIVKDVFVRVTVAK 124
            |:|       ::..|...|.|||:| :.|..:.....|.|.....|:|.:.:.: |..:|..:.:
Zfish    69 VSL-------IIQLPDEVVVPAGNT-SVSFAVQAKGVGQVTAYLSSNDTHIKSL-DARIRFLIVR 124

  Fly   125 SRALIYTSIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFTLYSMFNCGLYFIE 189
            |.||...:.|.||:||||||||||||.:.|::|:||.||||||||||:.||..||:||.||:::.
Zfish   125 SNALFIINQIIGWIYFVAWSVSFYPQAYENWKRRSVVGLNFDFLALNLTGFIAYSVFNVGLFWVT 189

  Fly   190 DLQNEYEVRYPLGVNPVMLNDVVFSLHAMFATCITILQCFFYQRAQQRVSFIAYGILAIFAVVVV 254
            .:|.|:..:.|.||.||..|||.|||||:..|.:.|.||..|:|..|:||.:|.|:|||......
Zfish   190 YIQEEFLKKDPNGVIPVDANDVFFSLHALLLTLVYICQCAIYERGGQKVSKVAIGLLAIGWTFAF 254

  Fly   255 VSAGLAGGSVIHWLDFLYYCSYVKLTITIIKYVPQALMNYRRKSTSGWSIGNILLDFTGGTLSML 319
            ||..:|....|.|||:|||.||:||.:|::||:|||.||||||||.||||||:|||||||:.|::
Zfish   255 VSLFVAVAKKISWLDYLYYFSYIKLGVTLVKYIPQAHMNYRRKSTEGWSIGNVLLDFTGGSFSLI 319

  Fly   320 QMILNAHNYDDWVSIFGDPTKFGLGLFSVLFDVFFMLQHYVFYRHSRESSSSDLTTVTDVQNRTN 384
            ||.|.|:|.|.|..|||||||||||:||:.||:.|::|||..|| :||....||    |.||..:
Zfish   320 QMFLEAYNNDKWRFIFGDPTKFGLGIFSIFFDILFIIQHYCLYR-NREPMYQDL----DEQNDQH 379

  Fly   385 ES 386
            .|
Zfish   380 SS 381

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CtnsNP_651116.1 2A43 129..362 CDD:130026 134/232 (58%)
ctnsNP_001018407.1 DUF6049 <26..105 CDD:437348 24/87 (28%)
2A43 130..362 CDD:130026 134/231 (58%)

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