DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17121 and Hsd17b3

DIOPT Version :10

Sequence 1:NP_651114.1 Gene:CG17121 / 42721 FlyBaseID:FBgn0039043 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_446459.1 Gene:Hsd17b3 / 117182 RGDID:621805 Length:306 Species:Rattus norvegicus


Alignment Length:331 Identity:80/331 - (24%)
Similarity:142/331 - (42%) Gaps:75/331 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 FNLKVIVFLLLLPLVLLAVFLKHL-LDYLFALGLKEKDVSGKVALVTGGGSGLGREICLELARRG 116
            |.|.|.:.:.|:.||....|.::| |.:..||........|:.|::||.|.|:|:....||||.|
  Rat     4 FLLSVGLLVCLVCLVKCVRFSRYLFLSFCKALPGSFLRSMGQWAVITGAGDGIGKAYSFELARHG 68

  Fly   117 CKLAVVDVNSKGCYETVELL------------SKIPRCVAKAYKNDVSSPRELQLMAAKVEKELG 169
            ..:.::.       .|:|.|            |::....|...:.|:....|.||...    |:|
  Rat    69 LNVVLIS-------RTLEKLQVISEEIERTTGSRVKVVQADFTREDIYDHIEEQLKGL----EIG 122

  Fly   170 PVDILVNNASLMPMTSTPS---LKSDEIDTILQLNLGSYIMTTKEFLPKMINRKSGHLVAVNALA 231
               :||||..::| ...||   ..|.|..:::..|:.|.:..|:..|..|.:|:.|.::.:::..
  Rat   123 ---VLVNNVGMLP-NLLPSHFLSTSGESQSVIHCNITSVVKMTQLVLKHMESRRRGLILNISSGV 183

  Fly   232 GLVPLPGAGIYTATKYGIEGFMESLRAELRLSDCDYVRTTVANAYLMRTSGDLPL---LSDAGIA 293
            |:.|.|...:|:|:|..:..|.::|..|.|...   :...|...|.:.|    |:   |:.:.:.
  Rat   184 GVRPWPLYSLYSASKAFVCTFSKALNVEYRDKG---IIIQVLTPYSVST----PMTKYLNTSRVT 241

  Fly   294 KSYPGLPTPYVAEKIVKGVLLNERMVYVP-----------KIFALSVWLLRLLPTK------WQD 341
            |:         |::.||     |.:.||.           :|.|:   :|.|:|::      .|.
  Rat   242 KT---------ADEFVK-----ESLKYVTIGAETCGCLAHEILAI---ILNLIPSRIFYSSTTQR 289

  Fly   342 YMLLRF 347
            ::|.:|
  Rat   290 FLLKQF 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17121NP_651114.1 Rossmann-fold NAD(P)(+)-binding proteins 94..338 CDD:473865 65/272 (24%)
Hsd17b3NP_446459.1 17beta-HSD1_like_SDR_c 44..281 CDD:187614 66/275 (24%)

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