DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17121 and rdh20

DIOPT Version :10

Sequence 1:NP_651114.1 Gene:CG17121 / 42721 FlyBaseID:FBgn0039043 Length:361 Species:Drosophila melanogaster
Sequence 2:XP_002933209.2 Gene:rdh20 / 100489103 XenbaseID:XB-GENE-22066217 Length:316 Species:Xenopus tropicalis


Alignment Length:290 Identity:84/290 - (28%)
Similarity:142/290 - (48%) Gaps:25/290 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 HLL----DYLFALGLK------EKDVSGKVALVTGGGSGLGREICLELARRGCKLAVVDVNSKGC 129
            |||    .::...|:|      ||.:...:.|:||.|.|:|:...||.|::|..|.:.|.:.: |
 Frog    18 HLLWDVCRHILLSGVKWVVKPEEKSIMDDICLITGSGGGIGKHFALEFAKKGAILVLWDSDPE-C 81

  Fly   130 YETVELLSKIPRCVAKA--YKNDVSSPRELQLMAAKVEKELGPVDILVNNASLMPMTSTPSLKSD 192
            .|  |...::.|..|:|  |..|....:::..:|.:|.:|:|.|.||:|:.|.....|....:.:
 Frog    82 NE--ETAKEVRRLGARAFTYTCDTGDRQQVYQVAERVRREVGDVTILLNHPSTGTGKSLLHCQDE 144

  Fly   193 EIDTILQLNLGSYIMTTKEFLPKMINRKSGHLVAVNALAGLVPLPGAGIYTATKYGIEGFMESLR 257
            |::..|:.|..:...|.|.|||:|.....||::.|.:..||........|....:...||.|:|.
 Frog   145 ELENALRTNCLANFWTVKAFLPRMNQMNHGHVINVASYLGLFATANMEDYCTAHFATVGFHEALS 209

  Fly   258 AELRLSDCDYVRTTVANAYLMRTSGDLPLLSDAGIAKSYPGLPTP----YVAEKIVKGVLLNERM 318
            .||:......|:||:...||    .|:.:.|...|.|....|.||    |.|.:.:.|:|.::.|
 Frog   210 HELKARRISGVKTTLLCPYL----ADIEMYSSFKIRKDLATLFTPLTSEYFARRAINGILTDQPM 270

  Fly   319 VYVPKIFALSVWLLRLLPTKWQD--YMLLR 346
            :.:||:..|:.:|.::||.:.|:  :.|:|
 Frog   271 ICMPKLLYLAAFLKQVLPWEVQELCHSLIR 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17121NP_651114.1 Rossmann-fold NAD(P)(+)-binding proteins 94..338 CDD:473865 74/249 (30%)
rdh20XP_002933209.2 17beta-HSDXI-like_SDR_c 47..291 CDD:187598 74/250 (30%)

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