DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13837 and cpg-2

DIOPT Version :10

Sequence 1:NP_651113.1 Gene:CG13837 / 42720 FlyBaseID:FBgn0039042 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_498551.3 Gene:cpg-2 / 175991 WormBaseID:WBGene00015102 Length:524 Species:Caenorhabditis elegans


Alignment Length:205 Identity:42/205 - (20%)
Similarity:68/205 - (33%) Gaps:65/205 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 GVYVASSSNCSK-YIYCAGPGSFEAECLDGHYYDEKLERCLDRKLVSRCRDPVGITTKSPSMVKK 97
            |.|  ||..|:. |.:|....:....|....:||...::|:.:.||..|::.:.||..|.....:
 Worm   144 GAY--SSGGCTTYYFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEECKEDLTITDGSGETSGE 206

  Fly    98 PAQKA--------------------------------EPLAITLR-----LLPNAGPCYP-YMVC 124
            .:.:|                                ||   |..     :.|| |.|.. ::.|
 Worm   207 GSGEASGEASGEGSGEASGESSGQGSGEASGEGSGELEP---TCEGKADGIHPN-GVCSTNFLTC 267

  Fly   125 YEGAGLAKACTPAHLV---------------SCNRMQTRENIINCQEGVYGFMPHPRNCAYFYYC 174
            ..|......| ||.||               .|..:.|.:.  .|:|.  |:....:..:.|..|
 Worm   268 SGGIARIMDC-PASLVFNPTILVCDWPRDVAECAGLPTPQP--TCEED--GYFSFGQCSSSFTAC 327

  Fly   175 SSGSKLVHRC 184
            ::|..:|..|
 Worm   328 TNGRAIVMFC 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13837NP_651113.1 CBM_14 36..81 CDD:426342 12/45 (27%)
CBM_14 154..203 CDD:426342 8/31 (26%)
cpg-2NP_498551.3 CBM_14 24..76 CDD:426342
CBM_14 138..190 CDD:426342 13/47 (28%)
ChtBD2 245..293 CDD:214696 13/52 (25%)
CBM_14 311..359 CDD:426342 7/29 (24%)
CBM_14 403..454 CDD:426342
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.