DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and RDH16

DIOPT Version :10

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_003699.3 Gene:RDH16 / 8608 HGNCID:29674 Length:317 Species:Homo sapiens


Alignment Length:196 Identity:49/196 - (25%)
Similarity:81/196 - (41%) Gaps:30/196 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 VTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIYKVRAKAYKANVTNYDDL---V 118
            :||...|.|:.::.:|..:|..:....:...|||....|..|    |.:....:||..:.:   .
Human    34 ITGCDSGFGKLLARQLDARGLRVLAACLTEKGAEQLRGQTSD----RLETVTLDVTKTESVAAAA 94

  Fly   119 ELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPDPA---------DVQLMINVNLTSHFWTKLVFLP 174
            :...:.|.:.| :..||||||:.:        |.         |...:::|||.......|..||
Human    95 QWVKECVRDKG-LWGLVNNAGISL--------PTAPNELLTKQDFVTILDVNLLGVIDVTLSLLP 150

  Fly   175 KMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLR 239
            .::..| |.:|.:||:.|...| :...|..:|.|..|...:||.||.....|   |..:.|.:.:
Human   151 LVRRAR-GRVVNVSSVMGRVSL-FGGGYCISKYGVEAFSDSLRRELSYFGVK---VAMIEPGYFK 210

  Fly   240 T 240
            |
Human   211 T 211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 YqjQ 49..305 CDD:440069 49/196 (25%)
RDH16NP_003699.3 Rossmann-fold NAD(P)(+)-binding proteins 30..305 CDD:473865 49/196 (25%)

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