DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and sdr16c5b

DIOPT Version :9

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_999936.1 Gene:sdr16c5b / 406799 ZFINID:ZDB-GENE-040426-2861 Length:306 Species:Danio rerio


Alignment Length:304 Identity:78/304 - (25%)
Similarity:146/304 - (48%) Gaps:40/304 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 NTLVKLQAIIAL---IGLAAITPLLILVALLGRLIAKLCWCSAP--KSIAGEVAVVTGAGHGLGR 66
            |.|::...::.|   :||.|...|.|                .|  |:::||:.::||||.|:||
Zfish     2 NFLLETLRVLFLSLVLGLEAFVRLFI----------------PPRRKNVSGELVLLTGAGSGIGR 50

  Fly    67 AISLELAKKGCHIAVVDINVSGAEDTVKQIQDIYKVRAKAYKANVTNYDDLVELNSKVVEEMGPV 131
            .::||.|:....:.:.|||..|.::|.:.|::.|..||..|..:.::.:::..:.::|..|:|.|
Zfish    51 LMALEFARLDARLVLWDINEDGNKETARLIKEKYGARAHTYTCDCSDREEVYRVANQVKREVGDV 115

  Fly   132 TVLVNNAGVMMHRNMFNPDPADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPL 196
            |:|:||||::..:...:...:.::..:.||..:||||...|||.|.....|.:|:|:|.||:..:
Zfish   116 TILINNAGIVTGKKFMDSPDSLIEKSMEVNSLAHFWTYKAFLPAMIAGNHGHLVSIASSAGLIGV 180

  Fly   197 PYSATYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHTIGFGD------ 255
            ...|.|..:|..|:....::.:||.......:..|.|.|.|:.|           |..|      
Zfish   181 NGLADYCASKFAAVGFAESMGLELLATGCDGVKTTIVCPFFINT-----------GMFDGANTKW 234

  Fly   256 --VYPLFTGEEVAQRIVAGMVRGEAEITVPGMACLLYRVILILP 297
              :.|:...:...::||..:.|.:..:.:|....::..:..:||
Zfish   235 PRLMPILDPDYACRKIVDAIRREQVYLYMPRSIYIIIGLRNLLP 278

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 adh_short 53..241 CDD:278532 57/187 (30%)
NADB_Rossmann 54..297 CDD:304358 64/250 (26%)
sdr16c5bNP_999936.1 17beta-HSDXI-like_SDR_c 38..281 CDD:187598 66/252 (26%)
adh_short 39..233 CDD:278532 59/204 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
44.020

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