DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and sdr16c5a

DIOPT Version :9

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_998043.2 Gene:sdr16c5a / 405814 ZFINID:ZDB-GENE-040426-2049 Length:306 Species:Danio rerio


Alignment Length:267 Identity:72/267 - (26%)
Similarity:137/267 - (51%) Gaps:21/267 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 KSIAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIYKVRAKAYKANVT 112
            |.::||:.::||:|.|:||.::||.|.....:.:.||||.|.::|.:|:::....|...|:.:.:
Zfish    32 KDVSGEIVLITGSGSGIGRLMALEFASLDVSLVLWDINVDGLKETAEQVKEKGASRVHYYQCDCS 96

  Fly   113 NYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPDPADVQLMINVNLTSHFWTKLVFLPKMK 177
            :.:.:..:..:|..|:|.||:|:||||::..:...:...|.::..:.||..|||||...|||.|.
Zfish    97 DREAVYRVADQVKSEIGDVTILINNAGIVSGKKFMDTPDALIEKTLRVNAMSHFWTYKAFLPAMM 161

  Fly   178 ELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRTLRMELDLENQKDIHVTTVLPSFLRTNS 242
            :...|.:|:::|.||:..:...|.|..:|..|:....::.:||....:..|..|.|.|..:.|  
Zfish   162 DKNHGHLVSVASSAGLIGVNGLADYCASKFAAVGFAESVALELLSAGKDGIKTTIVCPFLINT-- 224

  Fly   243 DVTQLTHTIGFGD--------VYPLFTGEEVAQRIVAGMVRGEAEITVPGMACLLYRVILILPAD 299
                     |..|        :.|:...:.||:|||:.::..:..:.:|.....|..:..::|  
Zfish   225 ---------GLFDGCGTKWPLLMPMLEPDYVAKRIVSAILTDQVFVLLPRSLYFLMALKGVIP-- 278

  Fly   300 WQDRIIL 306
            ::..:||
Zfish   279 YKQSVIL 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 adh_short 53..241 CDD:278532 56/187 (30%)
NADB_Rossmann 54..297 CDD:304358 66/250 (26%)
sdr16c5aNP_998043.2 adh_short 37..227 CDD:278532 58/200 (29%)
17beta-HSDXI-like_SDR_c 38..280 CDD:187598 67/254 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.920

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