DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and rdh10b

DIOPT Version :10

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_958488.1 Gene:rdh10b / 378722 ZFINID:ZDB-GENE-030909-7 Length:336 Species:Danio rerio


Alignment Length:286 Identity:80/286 - (27%)
Similarity:138/286 - (48%) Gaps:26/286 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 LIAKLCWCSAP--KSIAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDI 99
            ::|...|...|  ||:.|:|.|:||||.||||..:||.|::...:.:.|||....|:|.:..::|
Zfish    19 VLAGAKWFIRPREKSVEGQVCVITGAGSGLGRLFALEFARRRATLVLWDINRQSNEETAEMAREI 83

  Fly   100 YK-------------------VRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRN 145
            |:                   .:...|..:|:..:.:.....||..|:|.:.:|:|||||:..|:
Zfish    84 YRQLKPSTGSSDRVQELPLLQPKVYTYMCDVSKRESVYLTAEKVRSEVGDIDLLINNAGVVSGRH 148

  Fly   146 MFN-PDPADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGA 209
            :.: ||.. ::..:.||..:||||...|||||.||..|.|||::|..|:|.......|..:|.||
Zfish   149 LLDCPDEL-IERTMMVNCHAHFWTTKAFLPKMLELNHGHIVTVASSLGLFTTAGVEDYCASKFGA 212

  Fly   210 LAHMRTLRMELDLENQKDIHVTTVLPSFLRTNS-DVTQLTHTIGFGDVYPLFTGEEVAQRIVAGM 273
            :....:|..||...::..|.:|.|.|..:.|.. :..::...:  ...:|....|...::.:..:
Zfish   213 IGFHESLSHELKAADKDGIKMTLVCPFLVDTGMFEGCKIRKEM--APFFPPLKPEYCVKQAMRAI 275

  Fly   274 VRGEAEITVPGMACLLYRVILILPAD 299
            :..:..|..|.:..::..:..:||.|
Zfish   276 LTDQPMICTPRVMYMVTFMKTVLPFD 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 YqjQ 49..305 CDD:440069 76/272 (28%)
rdh10bNP_958488.1 17beta-HSDXI-like_SDR_c 38..302 CDD:187598 74/267 (28%)

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