DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13833 and firl

DIOPT Version :9

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001033900.2 Gene:firl / 34627 FlyBaseID:FBgn0032405 Length:318 Species:Drosophila melanogaster


Alignment Length:290 Identity:83/290 - (28%)
Similarity:148/290 - (51%) Gaps:20/290 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 EVVRNTLVKLQAIIALIGLAAITPLLILVALLGRLIAKLCWCSAPKSIAGEVAVVTGAGHGLGRA 67
            :|:::.|...:..:.::       |.:.|:|:..::.|     ..|.::||:.::||.|||:||.
  Fly    18 DVLKDVLQFFELYVRIL-------LELFVSLVQIVLPK-----KQKDVSGEIVLITGTGHGIGRE 70

  Fly    68 ISLELAKKGCHIAVVDINVSGAEDTVKQIQDIYKVRAKAYKANVTNYDDLVELNSKVVEEMGPVT 132
            ::|..|..|..:..|||:......||::.:.:......:|..:|:..|::..|..::..::|.::
  Fly    71 LALHYASLGSTVVCVDIDGKNNLQTVEKAKRLNLGEVYSYSCDVSKRDEVTALADRIKSDVGCIS 135

  Fly   133 VLVNNAGVMMHRNMFNPDPADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLP 197
            |||||.|:|....:......::|.:.:||:.|.|||...|||.|:|..:|.|:.:||:||:..:.
  Fly   136 VLVNNVGIMPTHPILQQSAEEIQRVFDVNVFSQFWTIQAFLPHMQEKCRGHIICMSSIAGLVGIS 200

  Fly   198 YSATYTTTKSGALAHMRTLRMELDLENQKD-IHVTTVLPSFLRTNSDVTQLTH-TIGFGDVYPLF 260
            ....|..||......|..|..||.....:| |..||:.|  ..||:.:.:  | .:.|..:..|.
  Fly   201 NLVPYCATKFAVRGLMEALHAELRQGPFRDLIRTTTIFP--YMTNTGLCK--HPKVKFPSILGLL 261

  Fly   261 TGEEVAQRIVAGMVRGEAEITVPGMACLLY 290
            ..::||:|||........|:|:|  :||||
  Fly   262 DPKQVAKRIVEAHRTDLMEVTIP--SCLLY 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 adh_short 53..241 CDD:278532 58/188 (31%)
NADB_Rossmann 54..297 CDD:304358 74/239 (31%)
firlNP_001033900.2 adh_short 56..246 CDD:278532 60/191 (31%)
17beta-HSDXI-like_SDR_c 57..299 CDD:187598 74/239 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447548
Domainoid 1 1.000 91 1.000 Domainoid score I1741
eggNOG 1 0.900 - - E2759_KOG1201
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1373099at2759
OrthoFinder 1 1.000 - - FOG0000227
OrthoInspector 1 1.000 - - mtm9177
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24322
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
87.850

Return to query results.
Submit another query.