DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and scu

DIOPT Version :9

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_523396.1 Gene:scu / 32789 FlyBaseID:FBgn0021765 Length:255 Species:Drosophila melanogaster


Alignment Length:203 Identity:52/203 - (25%)
Similarity:87/203 - (42%) Gaps:19/203 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 IAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINVSGAEDTVKQIQDIYKVRAKAYKANVTNY 114
            |...|::|||...|||||.:..|||:|..:.:.|:..|...:..|::.|    :......:||:.
  Fly     2 IKNAVSLVTGGASGLGRATAERLAKQGASVILADLPSSKGNEVAKELGD----KVVFVPVDVTSE 62

  Fly   115 DDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNPDP------ADVQLMINVNLTSHFWTKLVFL 173
            .|:........::.|.:.:.||.||.......||.:.      .|.|.:||:|....|....:..
  Fly    63 KDVSAALQTAKDKFGRLDLTVNCAGTATAVKTFNFNKNVAHRLEDFQRVININTVGTFNVIRLSA 127

  Fly   174 PKM------KELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRTLRMELDLENQKDIHVTT 232
            ..|      ::.::|.||..:|:|........|.|:.:|:..:.  .||.:..||..| .|.:.|
  Fly   128 GLMGANEPNQDGQRGVIVNTASVAAFDGQIGQAAYSASKAAVVG--MTLPIARDLSTQ-GIRICT 189

  Fly   233 VLPSFLRT 240
            :.|....|
  Fly   190 IAPGLFNT 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 adh_short 53..241 CDD:278532 51/200 (26%)
NADB_Rossmann 54..297 CDD:304358 51/199 (26%)
scuNP_523396.1 HSD10-like_SDR_c 3..255 CDD:187629 51/202 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45447544
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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