DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and Hsd17b13

DIOPT Version :10

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_001009684.1 Gene:Hsd17b13 / 305150 RGDID:1359553 Length:300 Species:Rattus norvegicus


Alignment Length:291 Identity:77/291 - (26%)
Similarity:142/291 - (48%) Gaps:15/291 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 ITPLLILVALL----GRLIAKLCWCSAPKSIAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDI 84
            |..||:||.::    ...:.|.......||:||:..::||||||:||..:.|.||:...:.:.||
  Rat     4 ILELLLLVGIIIYSYLESLVKFFIPQRRKSVAGQTVLITGAGHGIGRLTAYEFAKQKSRLVLWDI 68

  Fly    85 NVSGAEDTVKQIQDIYKVRAKAYKANVTNYDDLVELNSKVVEEMGPVTVLVNNAGVMMHRNMFNP 149
            :..|.|:|..:.:.:..| ...:..:.:|..::.:...:|.:|:|.:.::|||||.:...::.:.
  Rat    69 SKHGVEETAAKCRKLGAV-VHVFVVDCSNRAEIYKSVDQVKKEVGDIEIVVNNAGAIYPADLLST 132

  Fly   150 DPADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMR 214
            ...::.....||:..|||.....||.|.....|.|||::|:.|...:||...|.::|..|:...|
  Rat   133 KDEEITKTFEVNILGHFWIIKALLPSMLRRNSGHIVTVASVCGHRVIPYLIPYCSSKFAAVGFHR 197

  Fly   215 TLRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHTIGFGDVYPLFTGEEVAQRIVAGMVRGEAE 279
            .|..|||...:..|..:.:.|.|:.|.......|.      ::|:...:|||:.::.|::..:..
  Rat   198 ALTAELDTLGKTGIKTSCLCPVFVNTGFTKNPSTR------LWPVLEPDEVARSLIDGILTNKKM 256

  Fly   280 ITVPGMACLLYRVILILPADWQDRIILLFSR 310
            |.||.    ...:.||:...:.:|::...:|
  Rat   257 IFVPS----YINISLIVEMFFPERVLKAINR 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 YqjQ 49..305 CDD:440069 69/255 (27%)
Hsd17b13NP_001009684.1 17beta-HSDXI-like_SDR_c 38..277 CDD:187598 65/249 (26%)

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