DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13833 and SPBC16H5.14c

DIOPT Version :9

Sequence 1:NP_651111.1 Gene:CG13833 / 42718 FlyBaseID:FBgn0039040 Length:321 Species:Drosophila melanogaster
Sequence 2:NP_595933.1 Gene:SPBC16H5.14c / 2539946 PomBaseID:SPBC16H5.14c Length:286 Species:Schizosaccharomyces pombe


Alignment Length:258 Identity:54/258 - (20%)
Similarity:99/258 - (38%) Gaps:29/258 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LLILVALLGRLIAKLCWC-----SAPKSIAGEVAVVTGAGHGLGRAISLELAKKGCHIAVVDINV 86
            :|:||..|......|.|.     ....|.|..:.|:||....||.||..|...:|..:|.:|   
pombe     5 ILLLVISLVCAALTLSWFPLLFRKQSYSCAKGLIVITGGSGILGHAIIQEALDRGFSVASLD--- 66

  Fly    87 SGAEDTVKQIQDIYKVRAKAYKANVTNYDDLVELNSKVVEEMGPVT-VLVNNAGVMMHRNMFNPD 150
              :.:....:|  |..:..|.|.|:|...| ||.....:::|.... .|:|.|.:....::.:..
pombe    67 --STEPASFLQ--YNSKFSALKCNITKDKD-VEGCVHSLKKMNRTPFALINAAAIAPKNHLLSIS 126

  Fly   151 PADVQLMINVNLTSHFWTKLVFLPKMKELRKGFIVTISSLAGVFPLPYSATYTTTKSGALAHMRT 215
            ..::|.....|:...........|.:.:.....:|.|:|....|.......|:::|:..::...|
pombe   127 RQELQKCFETNVIGQLAITSALFPLLLQDPNPHVVNIASSLAYFSAMGVGAYSSSKAALVSLHET 191

  Fly   216 LRMELDLENQKDIHVTTVLPSFLRTNSDVTQLTHTIGFGD-----VYPLFTGEEVAQRIVAGM 273
            |..|          |.:..|:|..:...:.|:..|:...|     :.||...:.:|:.|:..:
pombe   192 LEEE----------VLSQHPNFKFSLYVLGQIKSTMFEKDTPNRVLAPLLEPQNLAKIIIQNL 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13833NP_651111.1 adh_short 53..241 CDD:278532 39/188 (21%)
NADB_Rossmann 54..297 CDD:304358 46/226 (20%)
SPBC16H5.14cNP_595933.1 17beta-HSDXI-like_SDR_c 37..271 CDD:187598 46/226 (20%)
adh_short 38..225 CDD:278532 42/204 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1201
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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