Protein Alignment lmd and zic3

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_001005691.1
• Gene: zic3 / 448197
• XenbaseID: XB-GENE-480431
• Length: 441
• Species: Xenopus tropicalis
• Alignment Length: 411
• Identity: 126/411 - (30%)
• Similarity: 174/411 - (42%)
• Gaps: 91/411 - (22%)

  Fly   239 SSAASPKLGNVFEEQVKEEASPAK--LPSMNSTFGTPKCIPMCASNYEDYANLYQQGSGYSTENY 301
            |.||:.||            |||.  |.|..|:..||                  |.|||:....
 Frog    43 SHAAAFKL------------SPASHDLSSSQSSAFTP------------------QASGYANSLG 77

  Fly   302 HNNMAQVVEKPNREHKAIWTIDEL---------DELMLGEQQQFLQHH----------------L 341
            | :..||.........:  |.|.|         |....|.|......|                |
 Frog    78 H-HAGQVPSYGGAAFNS--TRDFLFRNRNSGIADSTSAGGQHGLFASHGPPGIGEPPGHLIFPGL 139

  Fly   342 QQQHLQEQQEQLHQPHGQEQQTQNCKDDLVNYLSDEFIKAEEFRSLDSDDDENY------NEEED 400
            .:|.........|..:||..         :....|.|.:.:.:|::.|...::|      |....
 Frog   140 HEQSSSHTSSNGHVVNGQMH---------LGLRGDIFGRPDPYRAVPSPRTDHYAAAQFHNYNHM 195

  Fly   401 DLDNDVFA---PPA-----ESDPKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQAFVEHIE 457
            ::..:|.|   |.|     ....|.:.:|...|..|.|.      ....||..|......|.|:.
 Frog   196 NMSMNVAAHHGPGAFFRYMRQPIKQELSCKWLEESPMNR------PQKTCDRTFSSMHELVTHMT 254

  Fly   458 KCHVDVRKGEDFSCFWLDCPRRYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIH 522
            ..||...:..:..|:|.:|||..|.|.|:|||:.|:|||:||||..||||||.|.|:|.||||||
 Frog   255 MEHVGGPEQTNHICYWEECPRGGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 319

  Fly   523 QRSHTGERPYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHA 587
            :|:||||:|:.|:::||.:.|:|||||.||...|...|||.|::  |.|.||.|||||||:|.|.
 Frog   320 KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYICKV--CDKSYTHPSSLRKHMKVHE 382

  Fly   588 LRNANGQLRRKSAGGASVPPS 608
            .:.::......|...::.||:
 Frog   383 SQGSDSSPAASSGYESATPPA 403

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	55/91 (60%)
		C2H2 Zn finger	504..526	CDD:275368	16/21 (76%)
		C2H2 Zn finger	534..556	CDD:275368	11/21 (52%)
		C2H2 Zn finger	564..586	CDD:275368	13/21 (62%)
zic3	NP_001005691.1	zf_ZIC	216..261	CDD:436441	12/50 (24%)
		C2H2 Zn finger	273..293	CDD:275368	11/19 (58%)
		SFP1	<295..379	CDD:227516	52/85 (61%)
		C2H2 Zn finger	301..323	CDD:275368	16/21 (76%)
		C2H2 Zn finger	331..353	CDD:275368	11/21 (52%)
		C2H2 Zn finger	361..381	CDD:275368	13/21 (62%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	375..441		8/29 (28%)