Sequence 1: | NP_732811.1 | Gene: | lmd / 42717 | FlyBaseID: | FBgn0039039 | Length: | 866 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_524617.3 | Gene: | ci / 43767 | FlyBaseID: | FBgn0004859 | Length: | 1397 | Species: | Drosophila melanogaster |
Alignment Length: | 697 | Identity: | 188/697 - (26%) |
---|---|---|---|
Similarity: | 279/697 - (40%) | Gaps: | 199/697 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 189 QPANDSINLDIDYFNYDEINCQSKNQSPCSSPHLDAW-----LNFNLGEI----SAAASSSAASP 244
Fly 245 KLGNVFE--------------EQVKEEASPAKLPSMNSTFGTPKCIPMCASNYEDYANLYQQGSG 295
Fly 296 YS-----------TENYHNNMA----QVVEKP------NREHKAIWTIDELDEL---------ML 330
Fly 331 GEQQQFLQHHLQQQHLQEQQEQLHQPHGQEQQTQNCKDDLVNYLSDEFIKAEEFRSLDSDDDENY 395
Fly 396 NEEEDDLDN--DVFAPPAESD-PKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQAFVEHIE 457
Fly 458 KCHVDVRKGEDFSCFWLDCPRRYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIH 522
Fly 523 QRSHTGERPYGCQYKGCLKAFSNSSDRAKHQ-RTHYDTKPYACQLPGCTKRYTDPSSLRKHVKN- 585
Fly 586 HA-------------LRNANGQLRRKSAGGASVPPSGPKKAAKTRRH--------SESALVQRGV 629
Fly 630 GAGVGVAVPSAPGDQRQHRSN-------SCSEALLLQQHQQQQQQQQQQQKQHQP----ENERTT 683
Fly 684 DRSNCGTGVAANNNSMNFNELSNCIVIIEHNQSGGPAGPATLATATATTTATATYGNGNMAPAPE 748
Fly 749 TEVLSVCSGGGSSNSNSNNNRYNANINQLSELEQLLTTAK-PTGTPA 794 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lmd | NP_732811.1 | zf-H2C2_2 | 489..515 | CDD:290200 | 16/25 (64%) |
C2H2 Zn finger | 504..526 | CDD:275368 | 15/21 (71%) | ||
C2H2 Zn finger | 534..556 | CDD:275368 | 17/22 (77%) | ||
C2H2 Zn finger | 564..586 | CDD:275368 | 19/22 (86%) | ||
ci | NP_524617.3 | zf-H2C2_2 | 503..530 | CDD:290200 | 16/26 (62%) |
C2H2 Zn finger | 519..541 | CDD:275368 | 15/21 (71%) | ||
zf-H2C2_2 | 533..560 | CDD:290200 | 19/26 (73%) | ||
C2H2 Zn finger | 549..572 | CDD:275368 | 17/22 (77%) | ||
C2H2 Zn finger | 580..601 | CDD:275368 | 18/20 (90%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45466594 | |
Domainoid | 1 | 1.000 | 48 | 1.000 | Domainoid score | I8021 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D56141at7147 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R588 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.880 |