| Sequence 1: | NP_732811.1 | Gene: | lmd / 42717 | FlyBaseID: | FBgn0039039 | Length: | 866 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102147.1 | Gene: | Mtf1 / 362591 | RGDID: | 1308956 | Length: | 675 | Species: | Rattus norvegicus |
| Alignment Length: | 648 | Identity: | 145/648 - (22%) |
|---|---|---|---|
| Similarity: | 202/648 - (31%) | Gaps: | 277/648 - (42%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 392 DEN---YNEEEDDL-----------DNDVFAPPAESDPKPDSTCCDPEAEP------ENEVIPLI 436
Fly 437 CRWTGCDEEFPH---------------QQAFVEHI---EKCHVDVRKG----------------- 466
Fly 467 ----------EDFSCFWLDCPRRY---------------------------KPFNARYKLLIHMR 494
Fly 495 VHSGEKPNKCPFPGCNKAFSRLENLKIHQ-----------------------------RSHTGER 530
Fly 531 PYGCQYKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNH--------A 587
Fly 588 LRNANG--------------------QLRRKSA-------------------------------- 600
Fly 601 -----------GGASVPPSGPKKAAKTRRHSESALVQRGVG--------AGVGVAVPSAP--GDQ 644
Fly 645 RQHRSNSCSEALLLQQHQQQQQQQQQQQKQHQ---PENERTTDRSNCGTGVAANNNSMNFNELSN 706
Fly 707 CIVIIEHNQSGGPAGPATLATATA------TTT-------------ATATYGNG---NMAPAPET 749
Fly 750 EVL--SVCSG--------GGSSNSNSNNNRYNANINQLSELEQLLTTAKPTGTPAASANGISL 802 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lmd | NP_732811.1 | zf-H2C2_2 | 489..515 | CDD:290200 | 15/25 (60%) |
| C2H2 Zn finger | 504..526 | CDD:275368 | 12/50 (24%) | ||
| C2H2 Zn finger | 534..556 | CDD:275368 | 9/21 (43%) | ||
| C2H2 Zn finger | 564..586 | CDD:275368 | 8/21 (38%) | ||
| Mtf1 | NP_001102147.1 | COG5048 | <92..290 | CDD:227381 | 51/197 (26%) |
| C2H2 Zn finger | 144..163 | CDD:275368 | 4/18 (22%) | ||
| zf-H2C2_2 | 155..182 | CDD:290200 | 2/26 (8%) | ||
| C2H2 Zn finger | 171..193 | CDD:275368 | 7/21 (33%) | ||
| zf-H2C2_2 | 185..212 | CDD:290200 | 15/26 (58%) | ||
| C2H2 Zn finger | 201..223 | CDD:275368 | 11/21 (52%) | ||
| COG5048 | 226..>417 | CDD:227381 | 37/190 (19%) | ||
| C2H2 Zn finger | 235..252 | CDD:275368 | 1/16 (6%) | ||
| zf-H2C2_2 | 244..270 | CDD:290200 | 11/25 (44%) | ||
| C2H2 Zn finger | 260..282 | CDD:275368 | 9/21 (43%) | ||
| zf-H2C2_2 | 274..301 | CDD:290200 | 9/26 (35%) | ||
| C2H2 Zn finger | 290..312 | CDD:275368 | 8/21 (38%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 1 | 1.100 | - | - | O | PTHR19818 |
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.100 | |||||