Protein Alignment lmd and sp8b

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: XP_005158015.1
• Gene: sp8b / 324931
• ZFINID: ZDB-GENE-030131-3654
• Length: 455
• Species: Danio rerio
• Alignment Length: 215
• Identity: 68/215 - (31%)
• Similarity: 86/215 - (40%)
• Gaps: 67/215 - (31%)

  Fly   475 DCP-----RRYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGC 534
            |||     .|..|..|.   |....:||      |..|||.|.:.:..:||.|.|.||||||:.|
Zfish   292 DCPNCQEAERLGPAGAS---LRRKGLHS------CHIPGCGKVYGKTSHLKAHLRWHTGERPFVC 347

  Fly   535 QYKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQLRRKS 599
            .:..|.|.|:.|.:..:|.|||...|.:||  |.|.||:.....|.||||.|:...::|     |
Zfish   348 NWLFCGKRFTRSDELQRHLRTHTGEKRFAC--PVCNKRFMRSDHLSKHVKTHSAGGSSG-----S 405

  Fly   600 AGGASVPPSGPKKAAKT-RRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSNSCSEALLLQQHQQ 663
            ..||    ||.|:.:.| ..||                ||.:|         ||....|||
Zfish   406 GSGA----SGGKRGSDTDSEHS----------------VPGSP---------SCHSPDLLQ---- 437

  Fly   664 QQQQQQQQQKQHQPENERTT 683
                        .||:..||
Zfish   438 ------------APESVPTT 445

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	37/91 (41%)
		C2H2 Zn finger	504..526	CDD:275368	9/21 (43%)
		C2H2 Zn finger	534..556	CDD:275368	7/21 (33%)
		C2H2 Zn finger	564..586	CDD:275368	10/21 (48%)
sp8b	XP_005158015.1	SP8_N	19..316	CDD:411690	7/26 (27%)
		C2H2 Zn finger	320..339	CDD:275368	8/18 (44%)
		zf-H2C2_2	331..358	CDD:463886	14/26 (54%)
		C2H2 Zn finger	347..369	CDD:275368	7/21 (33%)
		zf-H2C2_2	361..384	CDD:463886	10/24 (42%)
		zf-C2H2	375..397	CDD:395048	11/23 (48%)
		C2H2 Zn finger	377..397	CDD:275368	10/21 (48%)