Protein Alignment lmd and btd

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_511100.1
• Gene: btd / 31912
• FlyBaseID: FBgn0000233
• Length: 644
• Species: Drosophila melanogaster
• Alignment Length: 635
• Identity: 131/635 - (20%)
• Similarity: 202/635 - (31%)
• Gaps: 211/635 - (33%)

  Fly   300 NYHNNMAQVVEKPNREHKAIWTIDELDELMLGEQQQF------LQHHL-------QQQHLQE--Q 349
            ||.|..||..:...::|        .......:|||.      .||||       ||||:|.  |
  Fly     7 NYLNPYAQQHQAQQQQH--------AQHQQHAQQQQHHLHMQQAQHHLHLSHQQAQQQHMQHLTQ 63

  Fly   350 QEQLHQPHGQEQQTQNCKDDLVNYLSDEFIKAEEFRSL-----------DSDDDENYNEEEDDLD 403
            |:|..|...|:||.|..:.........:|:.|....|.           .|.....|.:....|:
  Fly    64 QQQQQQQQQQQQQQQQQQQQQPQQQQHDFLSAAALLSAPPSLSGSSSGSSSGSSPLYGKPPMKLE 128

  Fly   404 ----------------------------NDVFAPPAES------DPK-PDSTCCDP--------- 424
                                        ..:|..||:|      .|. |.:|...|
  Fly   129 LPYPQASSTGTASPNSSIQSAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALA 193

  Fly   425 ----EAEPENE----------------------VIPLICRWT-------GCDEEFPHQQAFVEHI 456
                .:.|.:.                      |......|.       ....:||:.|...::.
  Fly   194 GSPTSSSPSSSAASAAAAAAAAAAAAADLGAAAVASAAYGWNTAYSGLGPARSQFPYAQYASDYY 258

  Fly   457 EKCHVDVRKGEDFSCFWLDCPRR-YKPFNAR-----------YKLLIHMRV-------------- 495
            ...     .|...|..|.....| |:|::::           ::..:..|.
  Fly   259 GNA-----VGMSSSAAWFSHQERLYQPWSSQSYPGFNFDDIAFQTQLQRRSVRCTCPNCTNEMSG 318

  Fly   496 --------HSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKH 552
                    ..|.|.:.|..|||.:.:.:..:||.|.|.||||||:.|  ..|.|.||.|.:..:|
  Fly   319 LPPIVGPDERGRKQHICHIPGCERLYGKASHLKTHLRWHTGERPFLC--LTCGKRFSRSDELQRH 381

  Fly   553 QRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNH-------------ALRNANGQL----RRKSA 600
            .|||.:.:||||  |.|:|:::....|.||.|.|             |...|...:    :.|.:
  Fly   382 GRTHTNYRPYAC--PICSKKFSRSDHLSKHKKTHFKDKKSKKVLAAEAKEQAAAAIKLEKKEKKS 444

  Fly   601 GGASVPPSGPKKA-------------AKTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSNSC 652
            |....||...|:.             |...:||.||      |:.|....|..|..|:|..:.:.
  Fly   445 GKPLTPPVEFKQEQPDTTPLVNYAPYANLYQHSTSA------GSSVNPPPPPPPLFQQQMTTTTS 503

  Fly   653 SEALLLQQHQQQQQQQQQQQKQHQPENERTTDRSNCGTGVAANNNSMNFNELSNCIVIIEHNQSG 717
            |.|....:               ||.:..::......|..|::::|.:.:..:..:|    :..|
  Fly   504 SAAASFVE---------------QPWSSSSSRAIQPATTSASSSSSSSASSPAAAVV----SAIG 549

  Fly   718 GPAGPATLATATAT--TTATATYGNGNMAPAPETEVLSVCSGGGSSNSNS 765
            ..:.||..|||.|.  ..|.|......:|......:..:.||....:|:|
  Fly   550 SASSPAASATALAQHHYAALAMQSESQLAAEYGLTMSGLASGASQDSSSS 599

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	37/113 (33%)
		C2H2 Zn finger	504..526	CDD:275368	8/21 (38%)
		C2H2 Zn finger	534..556	CDD:275368	8/21 (38%)
		C2H2 Zn finger	564..586	CDD:275368	8/21 (38%)
btd	NP_511100.1	C2H2 Zn finger	338..357	CDD:275368	7/18 (39%)
		zf-H2C2_2	349..374	CDD:463886	14/26 (54%)
		C2H2 Zn finger	365..385	CDD:275368	8/21 (38%)
		zf-H2C2_2	377..402	CDD:463886	11/26 (42%)
		zf-C2H2	391..413	CDD:395048	10/23 (43%)
		C2H2 Zn finger	393..413	CDD:275368	8/21 (38%)