Protein Alignment lmd and Klf11

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_001032431.2
• Gene: Klf11 / 313994
• RGDID: 1306646
• Length: 501
• Species: Rattus norvegicus
• Alignment Length: 563
• Identity: 120/563 - (21%)
• Similarity: 173/563 - (30%)
• Gaps: 223/563 - (39%)

  Fly    97 CHNYAGQDQQ-----QDSDQDDIVCAAAENTGMPYQQGQYTQLNREDIFRFEPEDIARLTGESEL 156
            |.:..||..|     ..||..|:..|...:|..|            |:    |:|....:.....
  Rat    53 CMSSWGQRSQVRPLTPVSDSGDVTTAVLMDTAAP------------DL----PKDFHSFSTLCIT 101

  Fly   157 PGMLQHPQTPYTPYTPYTPYTPCSAQNSQ----YAVQPANDSINLDIDYFNYDEINCQSKNQSPC 217
            |     ||:|.......|| .|....|||    .|:.|                        ||.
  Rat   102 P-----PQSPELMEPTGTP-VPSQVINSQGCMATALPP------------------------SPT 136

  Fly   218 SSPHLDAWLNFNLGEISAAASSSAASPKLGNVFEEQVKEEASPAKLPSMNSTFGTPKCIPMCASN 282
            ..|.     ..:.||....:|.|:....:.:|.....:   |||           |.|.|
  Rat   137 GGPR-----TLSKGEPPEPSSESSCRAVMTSVIRHTGE---SPA-----------PTCFP----- 177

  Fly   283 YEDYANLYQQGSGYSTENYHNNMAQVVEKPNREHKAIWT-------IDELDELMLGEQQQFLQHH 340
                       :|                |.:|..|..:       :|.|:.|    |...|...
  Rat   178 -----------TG----------------PTQEQPASDSRGGQDPLLDHLEAL----QDTRLADG 211

  Fly   341 LQQQHLQEQQEQLHQ-----PHGQEQQT------QNC-----KDDL------------------- 370
            |...:|...|..||:     |..:.|||      |.|     :.||
  Rat   212 LLVTNLVSCQPCLHKSGGLFPIDKGQQTVWPTAVQTCLPKNPESDLSRKTTPFISVPVSSPPVLC 276

  Fly   371 -------VNYLSDEFIKAEEFRSLDSDDDENYNEEEDDLDNDVF-APPAESDPK-------PDST 420
                   .|.:...|::..  ..|.:...:....:...:...|| .||.   |:       |.||
  Rat   277 QMIPVAGQNGMLSAFLRPP--TQLPAGTIKPILPQAASMSQPVFMGPPV---PQGTVMLVLPQST 336

  Fly   421 CCDPEAEPEN-------EVIPLICRWTGCDEEFPHQQAFVEHIEKCHVDVRKGEDFSCFWLDCPR 478
            ...|.|.|.:       :::||           .....||...:.|...|    |||       |
  Rat   337 FPQPAACPSSVMAIGNTKLLPL-----------APAPVFVASSQNCAPQV----DFS-------R 379

  Fly   479 RYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAF 543
            |                    :...|.||||.|.:.:..:||.|.|:||||:|:.|.:.||.|.|
  Rat   380 R--------------------RNYVCNFPGCRKTYFKSSHLKAHLRTHTGEKPFTCSWDGCDKKF 424

  Fly   544 SNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNH 586
            :.|.:.::|:|||...|.:.|  |.|.:|:.....|.||.:.|
  Rat   425 ARSDELSRHRRTHTGEKKFVC--PVCDRRFMRSDHLTKHARRH 465

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	33/91 (36%)
		C2H2 Zn finger	504..526	CDD:275368	10/21 (48%)
		C2H2 Zn finger	534..556	CDD:275368	8/21 (38%)
		C2H2 Zn finger	564..586	CDD:275368	7/21 (33%)
Klf11	NP_001032431.2	KLF11_N	40..383	CDD:409242	86/477 (18%)
		COG5048	381..>438	CDD:227381	24/56 (43%)
		C2H2 Zn finger	388..407	CDD:275368	8/18 (44%)
		C2H2 Zn finger	415..437	CDD:275368	8/21 (38%)
		zf-C2H2	443..465	CDD:395048	7/23 (30%)
		C2H2 Zn finger	445..465	CDD:275368	7/21 (33%)