Sequence 1: | NP_732811.1 | Gene: | lmd / 42717 | FlyBaseID: | FBgn0039039 | Length: | 866 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038941774.1 | Gene: | Glis2 / 302946 | RGDID: | 1309177 | Length: | 522 | Species: | Rattus norvegicus |
Alignment Length: | 477 | Identity: | 146/477 - (30%) |
---|---|---|---|
Similarity: | 194/477 - (40%) | Gaps: | 130/477 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 410 PAES--DPKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQAFVEHIEKCHVDVRKGEDFSCF 472
Fly 473 WLDCPRRYKPFNA-RYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQY 536
Fly 537 KGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANG-----QLR 596
Fly 597 RKSAGGASVPPSGP-KKAAKTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSNSCSEALLLQQ 660
Fly 661 HQQQQQQQQQQQKQHQPENERTTDRS--NCGTGVAANNNSMNFNELSNCIVIIEHNQSGGPAGPA 723
Fly 724 TLATATATTTA-----TATYGNGNMAPAPETEVLSVCSGGGSSNSNSNNNRYNANI--------- 774
Fly 775 --NQLSELEQLLTTAKPTGTPAASANGISLANNNGRANGDSKCHLSEFVSFEYVTKYLTDVYEPQ 837
Fly 838 CKSPQ----PPANFHLQPEFDN 855 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
lmd | NP_732811.1 | zf-H2C2_2 | 489..515 | CDD:290200 | 14/25 (56%) |
C2H2 Zn finger | 504..526 | CDD:275368 | 16/21 (76%) | ||
C2H2 Zn finger | 534..556 | CDD:275368 | 14/21 (67%) | ||
C2H2 Zn finger | 564..586 | CDD:275368 | 17/21 (81%) | ||
Glis2 | XP_038941774.1 | C2H2 Zn finger | 213..230 | CDD:275368 | 10/16 (63%) |
COG5048 | 234..>328 | CDD:227381 | 63/95 (66%) | ||
C2H2 Zn finger | 238..258 | CDD:275368 | 16/21 (76%) | ||
C2H2 Zn finger | 266..288 | CDD:275368 | 14/21 (67%) | ||
C2H2 Zn finger | 296..318 | CDD:275368 | 17/21 (81%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |