Protein Alignment lmd and Glis2

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: XP_038941774.1
• Gene: Glis2 / 302946
• RGDID: 1309177
• Length: 522
• Species: Rattus norvegicus
• Alignment Length: 477
• Identity: 146/477 - (30%)
• Similarity: 194/477 - (40%)
• Gaps: 130/477 - (27%)

  Fly   410 PAES--DPKPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQAFVEHIEKCHVDVRKGEDFSCF 472
            ||.|  .| |...|..||.....:   |:|||..|::.|...|..|:|:...||...:...:.|.
  Rat   145 PASSFLTP-PKDKCLSPELPLAKQ---LVCRWAKCNQLFELLQDLVDHVNDHHVKPEQDARYCCH 205

  Fly   473 WLDCPRRYKPFNA-RYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQY 536
            |..|.|..:.||| |||:|||:|.|:.|||::|  |.|||:||||||||||.||||||:||.|.|
  Rat   206 WEGCARHGRGFNASRYKMLIHIRTHTNEKPHRC--PTCNKSFSRLENLKIHNRSHTGEKPYVCPY 268

  Fly   537 KGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANG-----QLR 596
            :||.|.:||||||.||.||||..|||.|::|||.||||||||||||:|.|....::.     |||
  Rat   269 EGCNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHFVSHEQQELLQLR 333

  Fly   597 RKSAGGASVPPSGP-KKAAKTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRSNSCSEALLLQQ 660
            .........|.||. ...|:....:.:||.  |..:..|:.:|.|||
  Rat   334 PPPKPPLPTPDSGSYVSGAQIIIPNPAALF--GGPSLPGLPLPLAPG------------------ 378

  Fly   661 HQQQQQQQQQQQKQHQPENERTTDRS--NCGTGVAANNNSMNFNELSNCIVIIEHNQSGGPAGPA 723
                                 ..|.|  .||.|                      ...||..||.
  Rat   379 ---------------------PLDLSALACGNG----------------------GGGGGGMGPG 400

  Fly   724 TLATATATTTA-----TATYGNGNMAPAPETEVLSVCSGGGSSNSNSNNNRYNANI--------- 774
            ...:......|     .:.:|.|.:. .|...:|     |||:.|.:...:...::
  Rat   401 LPGSVLPLNLAKNPLLPSPFGAGGLG-LPVVSLL-----GGSAGSKAEGEKGRGSVPARVLGLED 459

  Fly   775 --NQLSELEQLLTTAKPTGTPAASANGISLANNNGRANGDSKCHLSEFVSFEYVTKYLTDVYEPQ 837
              ..|...|:..:...|.|.|......:.|:..|..|:                        .|:
  Rat   460 HKTSLERTERSRSRPSPDGLPLLPGTVLDLSTGNSAAS------------------------SPE 500

  Fly   838 CKSPQ----PPANFHLQPEFDN 855
            ..:|.    ||.:..|:|...|
  Rat   501 ALTPGWVVIPPGSVLLKPAVVN 522

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	64/91 (70%)
		C2H2 Zn finger	504..526	CDD:275368	16/21 (76%)
		C2H2 Zn finger	534..556	CDD:275368	14/21 (67%)
		C2H2 Zn finger	564..586	CDD:275368	17/21 (81%)
Glis2	XP_038941774.1	C2H2 Zn finger	213..230	CDD:275368	10/16 (63%)
		COG5048	234..>328	CDD:227381	63/95 (66%)
		C2H2 Zn finger	238..258	CDD:275368	16/21 (76%)
		C2H2 Zn finger	266..288	CDD:275368	14/21 (67%)
		C2H2 Zn finger	296..318	CDD:275368	17/21 (81%)