| Sequence 1: | NP_732811.1 | Gene: | lmd / 42717 | FlyBaseID: | FBgn0039039 | Length: | 866 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_780668.3 | Gene: | Glis3 / 226075 | MGIID: | 2444289 | Length: | 935 | Species: | Mus musculus |
| Alignment Length: | 721 | Identity: | 228/721 - (31%) |
|---|---|---|---|
| Similarity: | 288/721 - (39%) | Gaps: | 220/721 - (30%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 15 VKTSS------ISGISSISGKEAASCYGGFMSPPLSANITANNGER------------------- 54
Fly 55 ---EMFRVPGAKVETNESYACGELQFPDFSHLCFAAETPNSVFSDCHNYAGQDQQQDSDQDDIVC 116
Fly 117 AAAENTGMPYQQGQYTQLNREDIFRFEPEDIARLTGES---ELPGMLQHPQTPYTPY-TPYTPYT 177
Fly 178 PCSAQNSQ---YAVQPANDSINLDIDYFNYDEINCQSKNQSPCSSPHLDAWLNFNLGEISAAASS 239
Fly 240 SAASPKLGNVFEEQVKEEASPAKLPSMNSTFG-----TPKCIPMCASNYEDYANLYQQGSGYSTE 299
Fly 300 NYHNNMAQVVEKPNREHKAIWTIDELDELMLGEQQQFLQH-HLQQQHLQEQQEQLHQPHGQEQQT 363
Fly 364 QNCKDDLVNYLSDEFIKAEEFRSLDSDDDENYNEEEDDLDN--DVFAPPAESDPKP---DSTCCD 423
Fly 424 PEAEPENEVIPL------------------ICRWTGCDEEFPHQQAFVEHIEKCHVDVRKGEDFS 470
Fly 471 CFWLDCPRRYKPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQ 535
Fly 536 YKGCLKAFSNSSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQLRRKSA 600
Fly 601 GGASV---------------PPSGPKKAA-KTRRHSESALVQRGVGAGVGVAVPSAPGDQRQHRS 649
Fly 650 NSCSEA 655 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| lmd | NP_732811.1 | zf-H2C2_2 | 489..515 | CDD:290200 | 22/25 (88%) |
| C2H2 Zn finger | 504..526 | CDD:275368 | 17/21 (81%) | ||
| C2H2 Zn finger | 534..556 | CDD:275368 | 18/21 (86%) | ||
| C2H2 Zn finger | 564..586 | CDD:275368 | 20/21 (95%) | ||
| Glis3 | NP_780668.3 | C2H2 Zn finger | 506..525 | CDD:275368 | 7/18 (39%) |
| C2H2 Zn finger | 536..561 | CDD:275368 | 22/24 (92%) | ||
| SFP1 | <558..652 | CDD:227516 | 81/93 (87%) | ||
| C2H2 Zn finger | 569..591 | CDD:275368 | 17/21 (81%) | ||
| C2H2 Zn finger | 599..621 | CDD:275368 | 18/21 (86%) | ||
| PHA03247 | <612..861 | CDD:223021 | 58/125 (46%) | ||
| C2H2 Zn finger | 629..651 | CDD:275368 | 20/21 (95%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 1 | 1.000 | 67 | 1.000 | Domainoid score | I9777 |
| eggNOG | 1 | 0.900 | - | - | E33208_3BAZE | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S3867 |
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 1 | 1.000 | - | - | otm42966 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_109660 | |
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R588 |
| SonicParanoid | 1 | 1.000 | - | - | X3347 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| 9 | 8.740 | |||||