DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmd and SP7

DIOPT Version :10

Sequence 1:NP_732811.1 Gene:lmd / 42717 FlyBaseID:FBgn0039039 Length:866 Species:Drosophila melanogaster
Sequence 2:NP_690599.1 Gene:SP7 / 121340 HGNCID:17321 Length:431 Species:Homo sapiens


Alignment Length:65 Identity:16/65 - (24%)
Similarity:26/65 - (40%) Gaps:18/65 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 AVVAAAEATDIRSRNGKQPL---------------AEEDDDRTGRKGMMEEEKQEQGEEEAEEQD 195
            |.||.:||..:...:|.|.|               |...:.|..|..::|:   |:|.::.|..|
Human     2 ASVALSEAEKVYIVHGVQLLECGGNLFDAISIAVKAALFNTRIPRVRVLED---EEGAKDIELSD 63

  Fly   196  195
            Human    64  63

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmdNP_732811.1 SFP1 <493..585 CDD:227516
C2H2 Zn finger 504..526 CDD:275368
C2H2 Zn finger 534..556 CDD:275368
C2H2 Zn finger 564..586 CDD:275368
SP7NP_690599.1 SP7_N 2..295 CDD:411691 16/65 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..56 5/28 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..115
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 154..260
9aaTAD. /evidence=ECO:0000269|PubMed:31375868 156..164
C2H2 Zn finger 299..318 CDD:275368
zf-H2C2_2 310..337 CDD:463886
C2H2 Zn finger 326..348 CDD:275368
zf-H2C2_2 340..365 CDD:463886
C2H2 Zn finger 356..376 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 367..431
Blue background indicates that the domain is not in the aligned region.

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