DRSC/TRiP Functional Genomics Resources

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Protein Alignment lmd and KLF12

DIOPT Version :10

Sequence 1:NP_732811.1 Gene:lmd / 42717 FlyBaseID:FBgn0039039 Length:866 Species:Drosophila melanogaster
Sequence 2:XP_011533209.1 Gene:KLF12 / 11278 HGNCID:6346 Length:415 Species:Homo sapiens


Alignment Length:424 Identity:87/424 - (20%)
Similarity:159/424 - (37%) Gaps:110/424 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 QPANDSINLDIDYFNYD----EINCQSKNQSPCSSPHLDAWLNFNLGEISAAASSSAASPKLGNV 249
            :|..||  |.:|:|...    :::......||.:.......:..:....|:.::||::|.:|.  
Human    77 EPPEDS--LSVDHFQTQTEPVDLSINKARTSPTAVSSSPVSMTASASSPSSTSTSSSSSSRLA-- 137

  Fly   250 FEEQVKEEASPAKLPSM-----NSTFGTPKCIPMCASNY--EDYANLYQQGSGYSTENYHNNMAQ 307
                    :||..:.|:     :||..||..:...||..  :.:.::.......|..|..:|   
Human   138 --------SSPTVITSVSSASSSSTVLTPGPLVASASGVGGQQFLHIIHPVPPSSPMNLQSN--- 191

  Fly   308 VVEKPNREHKAIWTIDELDELMLGEQQQFLQHHLQQQHLQEQQEQLHQPHGQEQQTQNCKDDLVN 372
               |.:..|:....:..:..:....:.....::.....|.|.    .:.||:.|           
Human   192 ---KLSHVHRIPVVVQSVPVVYTAVRSPGNVNNTIVVPLLED----GRGHGKAQ----------- 238

  Fly   373 YLSDEFIKAEEFRSLDSDDDENYNEEEDDLDN------DVFAPPAESDPKPDSTCCDPEAEPENE 431
             :....:...:.:| |||||:..|...|.::.      .:.....|..|.|              
Human   239 -MDPRGLSPRQSKS-DSDDDDLPNVTLDSVNETGSTALSIARAVQEVHPSP-------------- 287

  Fly   432 VIPLICRWTG---CDEEFPHQQAFVEHIEKCHVDVRKGEDFSCFWLDCPRRYK----PFNARYKL 489
                :.|..|   .:::||           |.:        |.|.::..||.:    |.:.:   
Human   288 ----VSRVRGNRMNNQKFP-----------CSI--------SPFSIESTRRQRRSESPDSRK--- 326

  Fly   490 LIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSNSSDRAKHQR 554
               .|:|      :|.|.||||.:::..:||.|:|:||||:||.|.::||...|:.|.:..:|.|
Human   327 ---RRIH------RCDFEGCNKVYTKSSHLKAHRRTHTGEKPYKCTWEGCTWKFARSDELTRHYR 382

  Fly   555 THYDTKPYACQLPGCTKRYTDPSSLRKHVKNHAL 588
            .|...||:.|  ..|.:.::....|..|.:.|.|
Human   383 KHTGVKPFKC--ADCDRSFSRSDHLALHRRRHML 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lmdNP_732811.1 SFP1 <493..585 CDD:227516 32/91 (35%)
C2H2 Zn finger 504..526 CDD:275368 10/21 (48%)
C2H2 Zn finger 534..556 CDD:275368 7/21 (33%)
C2H2 Zn finger 564..586 CDD:275368 4/21 (19%)
KLF12XP_011533209.1 KLF12_N 40..237 CDD:410608 31/181 (17%)
COG5048 <241..414 CDD:227381 54/224 (24%)
C2H2 Zn finger 332..354 CDD:275368 10/21 (48%)
C2H2 Zn finger 362..384 CDD:275368 7/21 (33%)
zf-H2C2_2 376..401 CDD:463886 7/26 (27%)
C2H2 Zn finger 392..412 CDD:275368 4/21 (19%)

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