Protein Alignment lmd and glis2b

DIOPT Version :10

• Sequence 1: NP_732811.1
• Gene: lmd / 42717
• FlyBaseID: FBgn0039039
• Length: 866
• Species: Drosophila melanogaster
• Sequence 2: NP_001276814.1
• Gene: glis2b / 102725539
• ZFINID: ZDB-GENE-091204-120
• Length: 489
• Species: Danio rerio
• Alignment Length: 225
• Identity: 104/225 - (46%)
• Similarity: 131/225 - (58%)
• Gaps: 16/225 - (7%)

  Fly   416 KPDSTCCDPEAEPENEVIPLICRWTGCDEEFPHQQAFVEHIEKCHVDVRKGEDFSCFWLDCPRRY 480
            :|..|...|:...:.:   |.|||..|...|...|..|:|:...||...|...:.|.|..|.|:.
Zfish   146 QPKDTRASPDLSADEQ---LACRWRKCHLLFDSLQDLVDHVNDFHVKPEKDSGYCCHWEGCARKG 207

  Fly   481 KPFNARYKLLIHMRVHSGEKPNKCPFPGCNKAFSRLENLKIHQRSHTGERPYGCQYKGCLKAFSN 545
            :.||||||:|||:|.|:.|||::|  |.|||:||||||||||.||||||:||.|.|:||.|.:||
Zfish   208 RGFNARYKMLIHIRTHTNEKPHRC--PTCNKSFSRLENLKIHNRSHTGEKPYICPYEGCNKRYSN 270

  Fly   546 SSDRAKHQRTHYDTKPYACQLPGCTKRYTDPSSLRKHVKNHALRNANGQLRRKSAGGASVPPSGP 610
            ||||.||.||||..|||.|::.||.||||||||||||:|.|      |....:..||........
Zfish   271 SSDRFKHTRTHYVDKPYYCKMVGCLKRYTDPSSLRKHIKAH------GHFVAQEQGGGVGSLIKQ 329

  Fly   611 KKAAKTRRHSESALVQRGVGAGVGVAVPSA 640
            .:.|...:.||...|     :|..:.:|||
Zfish   330 SQIAGVGKDSELTYV-----SGAHIIIPSA 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
lmd	NP_732811.1	SFP1	<493..585	CDD:227516	63/91 (69%)
		C2H2 Zn finger	504..526	CDD:275368	16/21 (76%)
		C2H2 Zn finger	534..556	CDD:275368	14/21 (67%)
		C2H2 Zn finger	564..586	CDD:275368	16/21 (76%)
glis2b	NP_001276814.1	C2H2 Zn finger	207..223	CDD:275368	10/15 (67%)
		COG5048	227..>304	CDD:227381	55/78 (71%)
		C2H2 Zn finger	231..251	CDD:275368	16/21 (76%)
		C2H2 Zn finger	259..281	CDD:275368	14/21 (67%)
		C2H2 Zn finger	289..311	CDD:275368	16/21 (76%)