DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Pard3

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006531583.1 Gene:Pard3 / 93742 MGIID:2135608 Length:1337 Species:Mus musculus


Alignment Length:523 Identity:95/523 - (18%)
Similarity:153/523 - (29%) Gaps:216/523 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PRAAPAM-------------------------------ENYGFQLTRSKWDPYPWVCEVAAGTPA 63
            |.||||:                               |..||.:|..         :|..|..|
Mouse   431 PPAAPALAPPSVLSTNVGSVYNTKKVGKRLNIQLKKGTEGLGFSITSR---------DVTIGGSA 486

  Fly    64 ALC--------------GLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQK--DCVTILCWNSE--- 109
            .:.              .||.||.::||||.|:.|....|:..:::|.|  ..|::|.:..|   
Mouse   487 PIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEAF 551

  Fly   110 ---------------CDKDCDTNSICCAPMPTSLRRLSLVLESILRLVECPVCGVTISPPAMQCQ 159
                           .:...:...:...|..|   |..|..|  :.|.:....|:.:|....:.:
Mouse   552 HPREMNAEPSQMQTPKETKAEDEDVVLTPDGT---REFLTFE--VPLNDSGSAGLGVSVKGNRSK 611

  Fly   160 --------------NGHLLCVDCRIRSERCPVC------------RDFYTPRRALLAE-----QI 193
                          ||.....|.|:|.....:.            ....|.||::..|     .|
Mouse   612 ENHADLGIFVKSIINGGAASKDGRLRVNDQLIAVNGESLLGKANQEAMETLRRSMSTEGNKRGMI 676

  Fly   194 FLTIANAFEMCRS---------------------ENKLRQKLFAGI-------TR---------- 220
            .|.:|.....|..                     |.::...|::||       ||          
Mouse   677 QLIVARRISRCNELRSPGSPAAPELPIETELDDRERRISHSLYSGIEGLDESPTRNAALSRIMGE 741

  Fly   221 -------PVVG--RQDRITGQDTWRKRRPVLPTNKFLTKLLEGCAYSTDNLSPSNAATLLRTNTT 276
                   |.|.  ..|.:..:|   .|.||||.:  |:......::.......:.|.|..:...:
Mouse   742 SGKCQLSPTVNMPHDDTVMIED---DRLPVLPPH--LSDQSSSSSHDDVGFIMTEAGTWAKATIS 801

  Fly   277 DVAGDSSEIPARTSPVTATPPE------------------------RTTMHATLDANAA-HPSLS 316
            |.| |.|..| ...||.|...|                        :|....::|...| ...|:
Mouse   802 DSA-DCSLSP-DVDPVLAFQREGFGRQSMSEKRTKQFSDASQLDFVKTRKSKSMDLGIADETKLN 864

  Fly   317 TNDLQQEGVKPNAEGVDEESGTNSSHISATSLHGPPLPASVSPGINESSGLQPVR--IPPVTPSQ 379
            |.|             |:.:|:.|..:      ||.|      |:.:||.|:.::  :..||.:.
Mouse   865 TVD-------------DQRAGSPSRDV------GPSL------GLKKSSSLESLQTAVAEVTLNG 904

  Fly   380 DLP 382
            ::|
Mouse   905 NIP 907

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 26/120 (22%)
Pard3XP_006531583.1 DUF3534 2..83 CDD:338230
PDZ_signaling 272..347 CDD:238492
PDZ_signaling 465..544 CDD:238492 21/87 (24%)
PDZ_signaling 588..681 CDD:238492 15/94 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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