DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and Grip1

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_006514294.1 Gene:Grip1 / 74053 MGIID:1921303 Length:1185 Species:Mus musculus


Alignment Length:539 Identity:113/539 - (20%)
Similarity:173/539 - (32%) Gaps:174/539 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GSSVRLLRIPRAAPAMEN-YGFQL------TRSKWDPYPWVCEVAAGTPAALCG-LKPGDCVLEV 77
            ||||....:........| :||.:      .|:|..|....| |..|.||...| :||||.:|.|
Mouse   200 GSSVMFRTVEVTLHKEGNTFGFVIRGGAHDDRNKSRPVVITC-VRPGGPADREGTIKPGDRLLSV 263

  Fly    78 NGNDVLGLRVSEIAKMVKSQKDCVTILCWNSECDKDCDTNSICCAPMPTSLRRLSLVLESILRLV 142
            :|..:||...:|...::|......|:|.   |.|... .:|:..|..|.           ::.:.
Mouse   264 DGIRLLGTTHAEAMSILKQCGQEATLLI---EYDVSV-MDSVATASGPL-----------LVEVA 313

  Fly   143 ECPVCGVTISPPAMQCQNGHLLCVDCRIRS----ERCPVCR--------DFYTPRRALLAEQI-F 194
            :.|...:.::.....|.|..::.:| :|:|    :||....        |..:.....|||.. |
Mouse   314 KTPGASLGVALTTSVCCNKQVIVID-KIKSASIADRCGALHVGDHILSIDGTSMEYCTLAEATQF 377

  Fly   195 LTIANAFEMCRSE----NKLRQKLFAGITRPVVGRQDRITGQDTWRK------------------ 237
            |  ||..:..:.|    ::.|..| .|.....:.|.||....|.|..                  
Mouse   378 L--ANTTDQVKLEILPHHQTRLAL-KGPDHVKIQRSDRQHPWDAWASNQCGVHTNHHHNTYHPDH 439

  Fly   238 -RRPVLPTNKFL--------------TKLLEGCAYSTDNL----------SPSNAATLLR----- 272
             |.|.|...|.|              |.:   .|||..:|          |.|...|::|     
Mouse   440 CRVPALTFPKALPPNSPPAMVPSSSPTSM---SAYSLSSLNMGTLPRSLYSTSPRGTMMRRRLKK 501

  Fly   273 ----------TNTTDVAG-----DSSEIPARTSPVTA---------------------------T 295
                      ::|..:||     :::|:.....|||.                           :
Mouse   502 KDFKSSLSLASSTVGLAGQVVHTETTEVVLTADPVTGFGIQLQGSVFATETLSSPPLISYIEADS 566

  Fly   296 PPERTTMHATLDANAAHPSLSTND---------LQQEGVKPN---------AEGVDEESGTNSSH 342
            |.||..:....|...|...:.|.|         |:...:...         ||.|...|||  .|
Mouse   567 PAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAESVIPSSGT--FH 629

  Fly   343 ISATSLHGPPLPASVSPGINESSGLQPVRIPPVTPSQDLPQQVVQTKPASLLYRC-PCKLQDPQD 406
            :.....|      ||..||..||        |.:.....|..:...|..|:.:|. ..:|.|...
Mouse   630 VKLPKKH------SVELGITISS--------PSSRKPGDPLVISDIKKGSVAHRTGTLELGDKLL 680

  Fly   407 PAKDLH-QNCCYKSAFRLL 424
            ...::. .||..:.|.::|
Mouse   681 AIDNIRLDNCSMEDAVQIL 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 25/87 (29%)
Grip1XP_006514294.1 PDZ_signaling 110..190 CDD:238492
PDZ_signaling 209..292 CDD:238492 25/86 (29%)
PDZ_signaling 307..390 CDD:238492 18/96 (19%)
PDZ_signaling 526..614 CDD:238492 12/87 (14%)
PDZ_signaling 627..711 CDD:238492 20/89 (22%)
PDZ_signaling 727..808 CDD:238492
PDZ_signaling 1058..1138 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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