DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and pdzd3b

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001124259.1 Gene:pdzd3b / 566852 ZFINID:ZDB-GENE-081022-151 Length:524 Species:Danio rerio


Alignment Length:105 Identity:28/105 - (26%)
Similarity:47/105 - (44%) Gaps:19/105 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YGFQLTRSKWDPYPWVCEVAAGTPAALCGLKPGDCVLEVNGNDVLGLRVSEIAKMVKSQKDCVTI 103
            :||.|...:..|..::.:||||:|....||..||.|:||||.:|....:.::...||...:.:::
Zfish   406 FGFHLGCVQQKPGTFISQVAAGSPGQSSGLFQGDVVVEVNGQNVEKESLEDVIMHVKRGGETLSL 470

  Fly   104 LC-------WNSECDKDCDTNSICCAPMPTSLRRLSLVLE 136
            |.       |..:..|            |.:|.:|..:.|
Zfish   471 LVVDQKGYDWLKQNGK------------PVTLNKLETISE 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 21/64 (33%)
pdzd3bNP_001124259.1 PDZ_signaling 44..118 CDD:238492
PDZ 148..227 CDD:214570
PDZ_signaling 264..336 CDD:238492
PDZ 393..473 CDD:214570 22/66 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR14191
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.000

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