DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and grip1

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:XP_009298419.1 Gene:grip1 / 558006 ZFINID:ZDB-GENE-041210-125 Length:1191 Species:Danio rerio


Alignment Length:417 Identity:80/417 - (19%)
Similarity:136/417 - (32%) Gaps:162/417 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 YGFQL------TRSKWDPYPWVCEVAAGTPAALCG-LKPGDCVLEVNGNDVLGLRVSEIAKMVKS 96
            :||.:      .|:|..|.. :..:..|.||...| :||||.:|.::|..:.|...:|...::|.
Zfish   188 FGFVIRGGAHEDRNKSRPVT-ITTIRPGGPADREGTIKPGDRLLSIDGIRLHGASHAEAMSILKQ 251

  Fly    97 QKDCVTILCWNSECDKDCDTNSICCAPMPTSLRRLSLVLESILRLVECPVCGVTISPPAMQCQNG 161
            .....|:|.   |.|... .:|:..|..|..:.....:..|:         |:.:| .:|.| |.
Zfish   252 CGQEATLLI---EYDVSV-MDSVATASGPLLVEVAKSMGSSL---------GLALS-TSMYC-NK 301

  Fly   162 HLLCVDCRIR----SERCPVCRDFYTPRRALLAEQIFLTI-ANAFEMCRSENKLRQKLFAGITRP 221
            .::.:| :::    ::||          .||.|....|:: ..:.|.|         ..|..|:.
Zfish   302 QVIIID-KVKPASIADRC----------GALHAGDHILSVDGTSMEYC---------TLAEATQL 346

  Fly   222 VVGRQDRITGQDTWRKRRPVLPTNKFLTKL-LEGCAYSTDNLSPSNAATLLRTNTTDVAGDSSEI 285
            :....:.:        :..:||.::  |:| |:|                               
Zfish   347 LASASEHV--------KMEILPHHQ--TRLALKG------------------------------- 370

  Fly   286 PARTSPVTATPPERTTMHATLDANAAHPSLSTNDLQQEGVKPNAEGVDEESGTNS---------- 340
                       ||...:                   |...:|    :..|||||:          
Zfish   371 -----------PEHVKV-------------------QRSTRP----LPWESGTNNNSNFLPYQHY 401

  Fly   341 -------SHISA--TSLHGPPLPASVSPGINESSGLQPVRIPPVTPSQDLPQQVVQTKPASLLYR 396
                   ||..|  ||...|||.:|.||....:..|..:.:      ..||:.:..|.|...:.|
Zfish   402 NTYHPDQSHSQAKKTSPSNPPLGSSFSPTSMSAYSLSSLNM------NTLPRTMYPTSPRGTMMR 460

  Fly   397 CPCKLQDPQDPAKDLHQNCCYKSAFRL 423
            ...|.:|             |||:..|
Zfish   461 RKLKKKD-------------YKSSMSL 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 19/71 (27%)
grip1XP_009298419.1 PDZ_signaling 79..159 CDD:238492
PDZ_signaling 178..261 CDD:238492 20/76 (26%)
PDZ_signaling 276..359 CDD:238492 18/121 (15%)
PDZ_signaling 490..578 CDD:238492
PDZ_signaling 591..675 CDD:238492
PDZ_signaling 711..792 CDD:238492
PDZ_signaling 1053..1133 CDD:238492
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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