DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and a

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001014543.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster


Alignment Length:82 Identity:19/82 - (23%)
Similarity:37/82 - (45%) Gaps:17/82 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 PAMENYGFQLTRSKWDP-----------YPWVCEVAAGTPAALCGLKPGDCVLEVNGNDVLGLRV 87
            |.:::.||.:...:..|           :|      :|..|....|:.||.::|:|||.|.|:..
  Fly  1239 PGLKSLGFSIVGGRDSPKGNMGIFVKTVFP------SGQAADDGTLQAGDEIVEINGNSVQGMSH 1297

  Fly    88 SEIAKMVKSQKDCVTIL 104
            :|...:.|:.::...:|
  Fly  1298 AETIGLFKNVREGTIVL 1314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 18/80 (23%)
aNP_001014543.1 PDZ_signaling 775..865 CDD:238492
PDZ_signaling 1230..1317 CDD:238492 19/82 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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