DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6688 and pdzd11

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_998122.1 Gene:pdzd11 / 405893 ZFINID:ZDB-GENE-040426-2544 Length:142 Species:Danio rerio


Alignment Length:87 Identity:21/87 - (24%)
Similarity:37/87 - (42%) Gaps:5/87 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 HGDGSSVRLLRIPRA----APAMENYGFQLTRSKWDPYP-WVCEVAAGTPAALCGLKPGDCVLEV 77
            |.|.::.....:||.    .|.....||.:...|..... ::.:|...:.|...||:.||.||.|
Zfish    35 HPDYNNELAQFLPRTIVLKKPPGAQLGFNIRGGKASQLGIFISKVVPDSDAHRAGLQEGDQVLSV 99

  Fly    78 NGNDVLGLRVSEIAKMVKSQKD 99
            |..|...:..|...:::|:.::
Zfish   100 NEVDFQDIEHSRAVEILKTARE 121

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 19/81 (23%)
pdzd11NP_998122.1 PDZ_signaling 47..127 CDD:238492 19/75 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.