DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6688 and GRID2IP

DIOPT Version :9

Sequence 1:NP_651110.1 Gene:CG6688 / 42716 FlyBaseID:FBgn0039038 Length:424 Species:Drosophila melanogaster
Sequence 2:NP_001138590.1 Gene:GRID2IP / 392862 HGNCID:18464 Length:1211 Species:Homo sapiens


Alignment Length:557 Identity:110/557 - (19%)
Similarity:170/557 - (30%) Gaps:234/557 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 GQHGDGSSVRLLRIPRAAPAMENYGFQLTRSKWDPYPWVCEVAAGTPAALCGLKPGDCVLEVNGN 80
            |..|.|.:.|.:|:.:.     |..|..|.....|. |:..|..|:||....||.||.:|.:||.
Human   269 GLAGPGGARRTVRVYKG-----NKSFGFTLRGHGPV-WIESVLPGSPADNAALKSGDRILFLNGL 327

  Fly    81 DVLGLRVSEIAKMVKSQKDCVTILCWNSECDKDCDTNSICCAPMP----TSLRRLSLVLESILRL 141
            |:......::..|::......|::..........|::|: .:|.|    |||:.::.:|.|.:| 
Human   328 DMRNCSHDKVVSMLQGSGAMPTLVVEEGLVPFASDSDSL-DSPNPSSALTSLQWVAEILPSSIR- 390

  Fly   142 VECPVCGVTISPPAMQCQNGHLLCVDCRIRSERCPVCR----------------DFY----TPRR 186
                |.|.|.|.     |..|||     ...||..|||                |.|    ||.:
Human   391 ----VQGRTFSQ-----QLEHLL-----TPPERYGVCRALESFFQHRNIDTLIVDVYPVLDTPAK 441

  Fly   187 ALLAEQIFLTIA--------------------------------------------NAFEMCRSE 207
            .:|.:.|:..:.                                            .|..|||  
Human   442 QVLWQFIYQLLTYEEQELCQEKIACFLGYTAMTAEPEPELDLESEPTPEPQPRSSLRASSMCR-- 504

  Fly   208 NKLR-QKLFAGIT----------RPVVGRQDRITGQDTWRKRRPVLPTNKFLT------------ 249
            ..|| |.|.||::          .|:: ..:|..|..|   ..|..|..|.::            
Human   505 RSLRSQGLEAGLSCGPSECPEMPLPLI-PGERQAGDGT---SLPETPNPKMMSAVYAELESRLNS 565

  Fly   250 ---------------------------KLLEGCAYSTDNLSPSN------AATLLRTNTTD---- 277
                                       :.|.|.::.::.|.||.      :..|...::::    
Human   566 SFKGKMGTVSKSRASPPGPSPAVTTGPRTLSGVSWPSERLLPSPCYHPLCSGGLASPSSSESHPY 630

  Fly   278 VAGDSSEIP------------ARTSPVTATPPERTTMHATLDANAAHPSLSTN-----DLQQEGV 325
            .:.|||..|            :..||....||.|..:.     ..:||..|.:     |:..|.:
Human   631 ASLDSSRAPSPQPGPGPICPDSPPSPDPTRPPSRRKLF-----TFSHPVRSRDTDRFLDVLSEQL 690

  Fly   326 KPNAEGVDE-----------------------------------ESGTNSSHISATSLHGPPLPA 355
            .|....||:                                   |.|::.:: |:.|.|.||.|.
Human   691 GPRVTIVDDFLTPENDYEEMSFHDDQGSFVTNERSSASDCISSSEEGSSLTY-SSISDHIPPPPL 754

  Fly   356 SVSPGINESSGLQPVRIPPVTPSQDLPQQVVQTKPAS 392
            |..|             ||..|..|       .||:|
Human   755 SPPP-------------PPPLPFHD-------AKPSS 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6688NP_651110.1 PDZ_signaling 24..104 CDD:238492 21/79 (27%)
GRID2IPNP_001138590.1 PDZ_signaling 14..74 CDD:238492
HN_L-delphilin-R1_like 133..212 CDD:259820
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 226..269 110/557 (20%)
PDZ_signaling 278..353 CDD:238492 21/80 (26%)
HN_L-delphilin-R2_like 389..468 CDD:259821 20/93 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 478..502 1/23 (4%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..549 6/27 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 568..600 2/31 (6%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 618..672 10/58 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 718..783 17/75 (23%)
FH2 820..1188 CDD:280362
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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